Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0420 ATGGCCTCTGTGACCTTTGCGAAGTTTAACGCCTCGTCTTCGCAGTGGATCGGACAACAGTCCTTCTCTCAACGCCAGGGATCGTCCGCTCGCTTCCCGGCACGCAGAGTCTCGGTCCCGATCCGTGCCGGGTCGTACTCCGAGGAACTCGTTCAGACTGCTAAAACTGTTGCATCACCTGGCCGTGGTATACTAGCCATTGATGAGTCAAATGCTACCTGCGGGAAGAGGTTGGCATCTATTGGTCTGGACAATACAGAACCCAACCGTCAGGCCTATAGACAACTTCTACTGACCACTCCTGGCCTTGGTGAATATATTTCTGGGGCCATCCTTTTTGAGGAAACACTGTACCAGTCAACAACTGATGGAAAGAAGTTTGTGGACTGCTTGCGTGAAAAGAAAATTGTGCCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGATCAAACAATGAATCTTGGTGCCAAGGCCTGGATGGTTTGGCTTCAAGATCTGCTGAATACTATAAGCAAGGTGCTCGCTTTGCAAAGTGGCGCACTGTTGTTAGCATTCCCTGTGGTCCTTCTGCCTTGGCTGTCAAAGAAGCTGCATGGGGTCTTGCACGCTATGCTGCTATTTCTCAGGACAATGGTCTTGTGCCCATAGTAGAACCTGAGATTCTTCTTGATGGGGATCACCCAATTGATAGGACACTCGAAGTTGCAGAGAAAGTGTGGTCGGAGGTCTTCTTTTACTTGGCACAAAACAATGTCTTATTTGAAGGAATCCTACTTAAGCCTAGCATGGTAACCCCAGGAGCTGAACACAAGGAGAAGGCTTCTCCAGAGACCATCGCCAAATATACACTAACAATGCTTAGAAGGAGAGTACCTCCTGCAGTTCCTGGAATCATGTTTTTGTCTGGAGGGCAATCTGAAGTGGAAGCAACATTAAACCTGAATGCAATGAATCAAAGCCCCAACCCATGGCATGTTTCCTTCTCATATGCTCGTGCACTGCAAAACACTGTCCTAAAGACGTGGCAAGGACATCCTGAGAATGTTGAAGCGGCACAGAAGTCTCTTTTAGTTCGGGCAAAGGCAAACTCCCTGGCTCAGCTTGGAAAGTACTCTGCTGAAGGTGAAAGTGAGGAAGCTAAGAAAGGAATGTTTGTCCAGGGCTATACCTACTAA 1182 0.4814 MASVTFAKFNASSSQWIGQQSFSQRQGSSARFPARRVSVPIRAGSYSEELVQTAKTVASPGRGILAIDESNATCGKRLASIGLDNTEPNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLREKKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIDRTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGHPENVEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVQGYTY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0420 393 CDD FBP_aldolase_I_a 47 373 - -
Vvi1g0420 393 Gene3D Aldolase class I 34 392 IPR013785 -
Vvi1g0420 393 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 254 264 IPR029768 -
Vvi1g0420 393 FunFam Fructose-bisphosphate aldolase 32 392 - -
Vvi1g0420 393 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 44 393 IPR000741 GO:0004332|GO:0006096
Vvi1g0420 393 Pfam Fructose-bisphosphate aldolase class-I 49 393 IPR000741 GO:0004332|GO:0006096
Vvi1g0420 393 NCBIfam fructose-bisphosphate aldolase class I 49 369 - -
Vvi1g0420 393 SUPERFAMILY Aldolase 40 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0420 Vvi-Chr1 3939423 3943590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0420 46 393 Miscellaneous Gene Families AT3G52930 54.830 2.80e-131 379