Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0419 ATGTCCGTGGATGCCTCTGTGGAGCGAAGAACAGAGCCTGAGAACCGCAACGGTGATGGAAACGGGGTCGTTGCACCGAGCTCGACTCACAGGCTCCGGTTGAACCCGAACACCGATCACGAGCCGGACAACTACGAGGACCTTCAATTGGAGTTTAGTCCTTTGCTTTTCAGCTCTCTGGAGCAGTACTTGCCTCCCTTCATGTTGAATGCGCGACGTGATGTTAAGGTTCAGTACATGAGGGATATTCTGCTTCGGTACTCGAATGAGGCTGAACGGAATCGAGTTCAGAAGCAGAGAGAATACCGGCAGAAGATTATGTCGAGATATCAGCCTCTTCATAGGGAGCTCTATGCCATGAATGCTGAGAAGTTCTTTGTCCCCTCCTTTCTAGAAGCAATAAAAAATAATACAGAGGAGGGTTTTAGGAGTATAATATCCGAAAGCTCTCCTGGAGTTTATACTTTTGAGATGCTTCAACCGTGTTTCTGTGAAATGTTGATGTCAGAGGTAGAAAATTTTGAGAAATGGGTCTATGACACAAAATTCAGAATCATGCGACCAAATACAATGAATAAATATGGTGTTGTTCTTGATGATTTTGGCCTGGAAACCATGCTTGACAAGTTGATGGATAGCTTTATACGTCCTCTATCTAGAGTTTTCTTTCCTGACTTTGGTGGATCCACTCTGGATTCTCATCATGGTTTTGTGGTTGAATATGGAATGGATAGGGATCTGGACCTGGGTTTTCATGTTGATGATTCAGAAGTCTCTTTAAATGTTTGCTTGGGTCAGCAATTTTCTGGTGGAGAATTGTTCTTTCGAGGCATTCGATGTGATAAACATGTAAATACAGAAGCACGAGCAGAGGAAATTTTAGATTATTACCATGTTCCAGGACATGCAGTTCTTCATTGTGGTCGTCATCGTCATGGTGCTAGAGCCACAACATCTGGGCATAGGATGAACTTACTATTGTGGTGCAGAAGTGCAGTCTTTAGGGAGCTGAAGAAATATCAGAAAGATTTCTCTAGTTGGTGTGCAGTGTGCCAACATGAGAAGAAAGAGAGGCAGCGTGTAGCAGTTGCCACCACCAAACTGGAATTACTGAAGAGGGATGGAAATCCTGCTCCATGA 1140 0.4404 MSVDASVERRTEPENRNGDGNGVVAPSSTHRLRLNPNTDHEPDNYEDLQLEFSPLLFSSLEQYLPPFMLNARRDVKVQYMRDILLRYSNEAERNRVQKQREYRQKIMSRYQPLHRELYAMNAEKFFVPSFLEAIKNNTEEGFRSIISESSPGVYTFEMLQPCFCEMLMSEVENFEKWVYDTKFRIMRPNTMNKYGVVLDDFGLETMLDKLMDSFIRPLSRVFFPDFGGSTLDSHHGFVVEYGMDRDLDLGFHVDDSEVSLNVCLGQQFSGGELFFRGIRCDKHVNTEARAEEILDYYHVPGHAVLHCGRHRHGARATTSGHRMNLLLWCRSAVFRELKKYQKDFSSWCAVCQHEKKERQRVAVATTKLELLKRDGNPAP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0419 379 SMART p4hc 151 330 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vvi1g0419 379 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 232 331 IPR005123 -
Vvi1g0419 379 MobiDBLite consensus disorder prediction 1 42 - -
Vvi1g0419 379 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 11 366 - -
Vvi1g0419 379 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0419 Vvi-Chr1 3909357 3915641 Dispersed/Wgd