Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0406 ATGGAGGATGGAATTAGGATATCCGAGGATGCAGGTCTTTATCGCCCTCTCACAGATGGGTACACCAATGCTTCCGATGATTCTCGCCTCAAACAGCTGGGTTACAGGCAGGAGCTCAGCCGCAGTCTCTCCTCAATTGGCAACTTCGCGGTGACTTTCACAATCATATCAGTTCTCACCGGGCTGACCACGACGTTTAACACGGGCCTGACATATGGCGGCCCACTAACGATGGTGTATGGATGGCCCATAGTAGGCATGCTCACTCTGGTGGTTGGCCTAGCCATGGCCGAGATTTGTTCTGCTTATCCGACGTCTGGTGGGTTGTACTTCTGGAGCGCCAAGCTCTGTGGCAATGAATGGGGGCCTTTTGCTTCCTGGCTCACTGGCTGGTTCAACATTGTTGGTCAGTGGGCTGTTACAACAAGTATCGATTTCTCCCTTGCACAGATGATTCAGGTGATCATTCTTCTTAGCACAGGTGGAGCAAATGGTGGTGGATATGAGGCATCTAAATATGTAGTTATAGCTTTCCATGGGGGAATTCTGCTTATGCATGCTATATTAAACAGTCTTCCCATCTCAGTGTTGTCCTTCTTTGGGCAGCTTGCTGCAGCATGGAATATTGTAGGTGTCTTTGTTCTTATGATTCTCATTCCCTTGGTTGCCACAGAGAGGGCAAGTGCCAAGTTTGTTTTCACTTACTTCAACACTGATAGTGCCGAAGGAATCAACAGTAAAGCTTATATATTTGTCCTTGGGCTTCTAATGAGCCAGTATACCCTAACTGGGTATGATGCATCTGCTCACATGACGGAAGAAACCAAGAGCGCAGATGTAAATGGACCAAGAGGAATAATTAGTGCCATCGGCATATCTGTAATTGTTGGATGGGGTTACATAATTGGTATCACATTTGCAGTTACCGACATTTCATACCTTTTGAGTAGCACCAATGATGCTGGTGGTTATGCCATTGCTGAAGTATTTTACCAAGCATTCAAGAGCAGGTATGGCAGTGGAGTTGGAGGAATCATTTGCTTAGGAGTGGTTGCTGTTGCCATATTTTTCTGTGGGATGGGTTCAGTTACTAGCAACTCAAGATGCTGA 1110 0.4649 MEDGIRISEDAGLYRPLTDGYTNASDDSRLKQLGYRQELSRSLSSIGNFAVTFTIISVLTGLTTTFNTGLTYGGPLTMVYGWPIVGMLTLVVGLAMAEICSAYPTSGGLYFWSAKLCGNEWGPFASWLTGWFNIVGQWAVTTSIDFSLAQMIQVIILLSTGGANGGGYEASKYVVIAFHGGILLMHAILNSLPISVLSFFGQLAAAWNIVGVFVLMILIPLVATERASAKFVFTYFNTDSAEGINSKAYIFVLGLLMSQYTLTGYDASAHMTEETKSADVNGPRGIISAIGISVIVGWGYIIGITFAVTDISYLLSSTNDAGGYAIAEVFYQAFKSRYGSGVGGIICLGVVAVAIFFCGMGSVTSNSRC* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0406 369 PIRSF AA_transporter 23 369 - -
Vvi1g0406 369 ProSitePatterns Amino acid permeases signature. 73 104 IPR004840 GO:0006865|GO:0016020|GO:0055085
Vvi1g0406 369 PANTHER AMINO-ACID PERMEASE BAT1 22 369 - -
Vvi1g0406 369 Pfam Amino acid permease 47 368 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi1g0406 369 Gene3D Amino acid/polyamine transporter I 40 369 - -
Vvi1g0406 369 FunFam Amino-acid permease BAT1 39 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0406 Vvi-Chr1 3826036 3832496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0406 90 368 Organic Solute Cotransporters AT2G01170 77.419 2.47e-142 409