Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0402 ATGCCAGAGATTCAATTGGGAGCTCACACTATAAGATCCCATGGACTTAAAGTAGCAAGGTCACATATGCATGATTGGCTGATTCTCATACTACTTGTGGTAATTGAGGTCATTCTGAATGTTATTGAACCATTTCACCGCTTTGTTGGAAAGGAGATGCTAACAGACCTGTCTTACCCATTGCAAACCAATACTATTCCCTTTTGGAGTGTACCATTAATTGCAATATTGTTACCCATTGTTGTGATTCTTGTCTACTACTTCATTAGACAGGATGTTTATGATTTACACCATGCCATATTGGGCCTTCTATTCTCTGTACTGATCACGGCAGTTATAACTGATGCAATTAAAGATGCTGTTGGCCGACCTCGTCCAGACTTCTTTTGGCGTTGTTTCCCTAATGGGAAAGGGGTGTTTGACACTAGAACAACAGATGTTCTGTGTACTGGAGACAAAAGTGTCATCAAGGAAGGACATAAAAGTTTCCCTAGTGGGCATACTTCTTGGTCCTTTGCCGGACTCAGCTTCCTCTCATGGTACTTGTCAGGCAAAATCAGGGCATTTGATCGTAAAGGCCATGTAGCAAAGCTCTGTATTGTTTTCCTGCCCATACTTCTTGCAGCTCTAGTGGGAGTTTCTCGAGTAGATGACTATTGGCATCACTGGCAAGATGTATTTGCCGGAGGTGTAATAGGAGCAACAGTTGCTTCATTTTGTTACTTGCAATTCTTTCCACCCCCTTATGACATAGATGGTTGGGGACCTCATGCATATTTTGAGATGTTAGCGGAAAGCCGAAATGGTATTCAGTCCTCAACCACAGGTATTAATCATCTCAGCATGGGCGTAACGGAGCTTCAGAGTATACATGTTGAAAGTCATCTGGGCATGGACACATCAGTAGTTTACACCCGTGATACAAGCCCCATTTTGGATGGATTGAACAGTGGGAGGAGGAATTGA 966 0.4286 MPEIQLGAHTIRSHGLKVARSHMHDWLILILLVVIEVILNVIEPFHRFVGKEMLTDLSYPLQTNTIPFWSVPLIAILLPIVVILVYYFIRQDVYDLHHAILGLLFSVLITAVITDAIKDAVGRPRPDFFWRCFPNGKGVFDTRTTDVLCTGDKSVIKEGHKSFPSGHTSWSFAGLSFLSWYLSGKIRAFDRKGHVAKLCIVFLPILLAALVGVSRVDDYWHHWQDVFAGGVIGATVASFCYLQFFPPPYDIDGWGPHAYFEMLAESRNGIQSSTTGINHLSMGVTELQSIHVESHLGMDTSVVYTRDTSPILDGLNSGRRN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0402 321 FunFam Lipid phosphate phosphatase 2 20 252 - -
Vvi1g0402 321 Pfam PAP2 superfamily 100 245 IPR000326 -
Vvi1g0402 321 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 22 249 IPR036938 -
Vvi1g0402 321 CDD PAP2_containing_1_like 55 244 - -
Vvi1g0402 321 PANTHER LIPID PHOSPHATE PHOSPHATASE 12 270 IPR043216 GO:0006644
Vvi1g0402 321 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 18 250 - -
Vvi1g0402 321 SMART acid_phosph_2 98 241 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0402 Vvi-Chr1 3798738 3803409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0402 1 290 Lipid Metabolism Gene Families AT1G15080 80.000 1.18e-168 468