Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0400 ATGGAAAGGCGTGTAGGTGTAGGTTGTAGCCAACATGAAGAAGCCAAGATGAAAGTCAAAGGATCGAGCAGCGACAATTCATCAAAACTAAGTCGCCGCCTTGACCATCGGATGCACATTTTGACCTTAGTTCCCGACAGTGGATCTATGGCTTGGAGGTATCCGGGTAGCCTTTTTGGTTCCCGTTGGAATTTTTCGAGTGTTTTTCAGGGCACAATAAGGGAGGTTGAACCTGGTTGTCACACTATCAAATCTCATGGAGTCCAAGTGGCAAGAGATCACAAGCATGATTGGCTTATATTGCTGCTTCTTGTAATGTTAGAGATCATTCTACTTGTCATTCATCCATTTTACCGCTTTGTGGGAAAAGATATGATGGATGACCTTAAATATCCTTTGAAAGATAACACAGTACCTGTGTGGGCTGTTCCAATCTATGCTGTTCTGTTGCCGATTGTCATTTTTATTCTATTCTATCTTCGTAGGAGGGATGTATATGATCTGCACCACAGCATACTAGGCCTCTTATTTTCTGTGCTGATCACTGCGGTTATCACGGATGCAATAAAAGATGCAGTTGGACGGCCTCGGCCAGACTTCTTTTGGCGCTGCTTTCCTGATGGAAAAGATGTGTATGATCAGTGGGGAGATGTTATATGCCATGGAAAGGATAGCATTATAAGGGAGGGACATAAGAGCTTCCCAAGTGGTCACACTTCGTGGTCCTTTGCAGGCCTGGGTTTCCTATCATTGTACTTATCAGGAAAGATTCAAGCATTTGACCGCAAAGGGCATGTTGCAAAACTATGCATTGTTTTCCTCCCTCTACTTGCTGCATCTCTTGTTGGAGTTTCTCGGGTGGATGACTATTGGCACCATTGGCAAGATGTGTTTGCTGGAGGTCTTCTAGGGCTTGTTGTTGCATTTTTTTGCTATCTGCAGTTCTTTCCTCCTCCATATGATAATAATGGATCGGGCCCCTATGCATACTTCAAAATGTTAGAGGAGTTGAGGGCCAACAGAGAAGCAGCCCATTCTGTGAATGTGCAAGATGCGCAAGGAATGGAGGTTGTTTTACCTCAGCAACCTTCACGAAACAACAAAGGGTTTATGCCATTATCTCTTGACCATGATGCTACTGATTCTTTGGATCAAATGGAAGATGGGAGGAGGTTCAGAGCAGTATGTTCGTCATGGGGCTTGGTTGCCTCCAATGCAAGATCTCAACTATTCAAGCCTCTCAGTCCAATGCTGCTGTTGCCTTCTAACAAAGATGATGAAGTTCACCACCTCTTCGACTTCTCCGTGAACAAGGCTTTTTGGATTCCACTCCCGGAGGTTTACGGTAAGTGGTGTTGCCATTCGTGGAATGGATGGTTAGTAACAATAACGTGTTCTCCTCCCTACCCAATAGAGTTCTTTAATCCTATGTCGAGGGCACAAATCCAGTTGCCTCTCCCAGAGACGTTTCAAGATCCTCCAGCTGATGTAGATGATGCACCAATTGAGAGCTTCATATACAAAGCCATACCTTCTTCAACTCCTTCAGATCCCAATTGTGTTACCATGAAGAAAGTTGGCATTCTGTAA 1590 0.444 MERRVGVGCSQHEEAKMKVKGSSSDNSSKLSRRLDHRMHILTLVPDSGSMAWRYPGSLFGSRWNFSSVFQGTIREVEPGCHTIKSHGVQVARDHKHDWLILLLLVMLEIILLVIHPFYRFVGKDMMDDLKYPLKDNTVPVWAVPIYAVLLPIVIFILFYLRRRDVYDLHHSILGLLFSVLITAVITDAIKDAVGRPRPDFFWRCFPDGKDVYDQWGDVICHGKDSIIREGHKSFPSGHTSWSFAGLGFLSLYLSGKIQAFDRKGHVAKLCIVFLPLLAASLVGVSRVDDYWHHWQDVFAGGLLGLVVAFFCYLQFFPPPYDNNGSGPYAYFKMLEELRANREAAHSVNVQDAQGMEVVLPQQPSRNNKGFMPLSLDHDATDSLDQMEDGRRFRAVCSSWGLVASNARSQLFKPLSPMLLLPSNKDDEVHHLFDFSVNKAFWIPLPEVYGKWCCHSWNGWLVTITCSPPYPIEFFNPMSRAQIQLPLPETFQDPPADVDDAPIESFIYKAIPSSTPSDPNCVTMKKVGIL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0400 529 FunFam Lipid phosphate phosphatase 2 92 323 - -
Vvi1g0400 529 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 93 320 IPR036938 -
Vvi1g0400 529 MobiDBLite consensus disorder prediction 1 31 - -
Vvi1g0400 529 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g0400 529 Pfam PAP2 superfamily 173 316 IPR000326 -
Vvi1g0400 529 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 93 325 - -
Vvi1g0400 529 SMART acid_phosph_2 175 312 IPR000326 -
Vvi1g0400 529 CDD PAP2_containing_1_like 129 315 - -
Vvi1g0400 529 PANTHER LIPID PHOSPHATE PHOSPHATASE 83 350 IPR043216 GO:0006644
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0400 Vvi-Chr1 3776554 3783411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0400 73 390 Lipid Metabolism Gene Families AT3G02600 68.339 2.88e-159 454