Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0386 ATGGCGTCAGACATTTCAACGATTTTTCCGAGGGTTCTTATCGTCTCTCGACGGACCGTTCGCAAGAACAAGTTTGTAGATTTTGTGGGAGAATATCATCTTGATCTTATAGTAAACTATGGAGCAGTACCTGTAATCGTCCCAAGAGTTAGTGGAGTCCACATGCTGCTAGAAAGCTTCGAGCCAATCCATGGCGTTCTCCTATGCGAGGGTGAAGACATTGATCCATCCCTTTACGACGCAGAGCTTTCTGGCTTTTCCCCAGAAGAAATTGAAGAGATCAGGCGGTTGCATGCCAGTGACATAGCCATTGATCGAGAGAAAGATTCAATTGAGTTACTCCTTGCTAAGCTTTGCCTGGAAAGGAGCATACCCTTCTTAGGCATCTGCAGGGGATCGCAGGTCCTTAACGTTGCATGTGGAGGTAGCCTTTATCAGGACGTAGAGAGAGAACTCTCAAAGAAGTGCCCAGAAGGGCAGAGAGTGGTTCATATGAACTACGAAAATTATGATGGGCATCGGCACATAGTGAAGGTGGTGGAGAACACCCCTTTGCATCACTGGTTTAAAGATTCTTTGGAGGCTAACAAAATGGATATATGGGTAAATAGTTATCATCATCAGGGCGTTAAAAGATTAGCTCAGAGATTCGTCCCAATGGCCTTCGCTCCTGATGGCTTGGTTGAAGGATTCTATGATCCCCACGTTTATAATCCCGAAGAGGGTAACTTTATCATGGGTCTGCAGTTTCATCCTGAGCGGATGCGACAACCGAATTCTGATGATTTTGATTATCCAGGATGCCCCTCTGCATATCAGGAATTTGTCAAGGCAGTGAAAGCTTACCAAAAGAAGCTCAATGGTTCAGCATTTGTGGCCAAGACTCTAAAGCTTGACGAAGATGTGGAGAAGAAGAGAAAGGTGATTGGTCGAAGTTTCTCAATTGCAAGAGACATGTACAGCACCCGCAGAGGAATGCTTGGGGAAGAGGAATCTGAACTCGAAGTTGGAGCAAAGTTTCTGGAGGCAAATACAGCATTGAGTTTGCAGCAGGAGAAGAGGTTGAAGCAGATGGGTGCAACAGTGAGAAATGCTTCAGTGTACATGGAAAGGTTGAAGATGAATGAGGAAAAGGAAAAACTTGCAAGGACAATGATGGGGAAGATGTCCATTGAACAGTTATCCGAAATTGTGTCCTTCTACCACATGATGGGGCGAATTTGTTCAGAGGTTTTAGAGAGAAAACTTCACAACTTGACGAATGAAATTGGTGGCTGA 1278 0.4484 MASDISTIFPRVLIVSRRTVRKNKFVDFVGEYHLDLIVNYGAVPVIVPRVSGVHMLLESFEPIHGVLLCEGEDIDPSLYDAELSGFSPEEIEEIRRLHASDIAIDREKDSIELLLAKLCLERSIPFLGICRGSQVLNVACGGSLYQDVERELSKKCPEGQRVVHMNYENYDGHRHIVKVVENTPLHHWFKDSLEANKMDIWVNSYHHQGVKRLAQRFVPMAFAPDGLVEGFYDPHVYNPEEGNFIMGLQFHPERMRQPNSDDFDYPGCPSAYQEFVKAVKAYQKKLNGSAFVAKTLKLDEDVEKKRKVIGRSFSIARDMYSTRRGMLGEEESELEVGAKFLEANTALSLQQEKRLKQMGATVRNASVYMERLKMNEEKEKLARTMMGKMSIEQLSEIVSFYHMMGRICSEVLERKLHNLTNEIGG* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0386 425 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 22 285 - -
Vvi1g0386 425 SUPERFAMILY Class I glutamine amidotransferase-like 29 282 IPR029062 -
Vvi1g0386 425 CDD GATase1_2 12 262 - -
Vvi1g0386 425 PANTHER GLUTAMINE AMIDOTRANSFERASE PB2B2.05-RELATED 3 419 IPR044668 GO:0016811
Vvi1g0386 425 Gene3D - 9 290 IPR029062 -
Vvi1g0386 425 Pfam Peptidase C26 27 253 IPR011697 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0386 Vvi-Chr1 3668907 3670737 Dispersed/Wgd