Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0373 ATGTCTCTTCCTCACCAAAGCTTTGTGTCCAGTTTTCCTTCACAAATGGAAGAATACTTGCAGCTTTTCAAGAGTGAAACCGATTTCTACAACCAAATTGTGCTAGGAAGTCTGTTGCCTGAAAACATATGGAGATCTCTACCTCATGTTTGCAGGACATGGTTGAGAAACTATGTTGCAGGAGTCTTAGTTTACTCCATTACTGGGTTTTTGTGGTGTTTCTACATTTACTACCTCAAACGGGATGTTTATATTCGTGGAGATGCCATACCTTCAATGAAGACTATGGTTTTGCACGTCAAAGCTTCCATGAGGAGTTTGCCCTGGTTTGCTGCTCTCCCAACATTTTCAGAGTATGCAGTCGAAAATGGGTGGACAAAGTGCTTTTCAAGAATAAGTGAAGTTGGCTGGTTTGCCTACTTGGTGTACATCATGGCATATATTGTTTTTGTGGAGTTCGTAACATATTGGATTCACAGAAAGTTGCATGACATAAAACCCTTGTACAAGTATCTTCATGTACAGCATCACAGTTACAACAAGCAGCACAAACTTTCTCCTCTTGCTGGCTTGGCTCTTCATCCTTTGGACGGTATAGCTCAGGGAGGGCCCCATGAGATAGCAATCTTCCTGGTGCCAACCCATTTCACAACTCACCTCACTGTTGTATTCTTGGGGGCCATATGGTCTGCAAATATTCATGACTGCATTGATGAGAAGATGTGGCCGCTAATGGGAGGGGGTTATCATGTAATACATCATTTGTCAAACCGCCATAACTATGGTCTTTACACAATATGGATGGATTGGATGTTTGGAACTCTCTCTCATCCTGTTTCCAACCCAACCAAGCCAAACTGA 861 0.4251 MSLPHQSFVSSFPSQMEEYLQLFKSETDFYNQIVLGSLLPENIWRSLPHVCRTWLRNYVAGVLVYSITGFLWCFYIYYLKRDVYIRGDAIPSMKTMVLHVKASMRSLPWFAALPTFSEYAVENGWTKCFSRISEVGWFAYLVYIMAYIVFVEFVTYWIHRKLHDIKPLYKYLHVQHHSYNKQHKLSPLAGLALHPLDGIAQGGPHEIAIFLVPTHFTTHLTVVFLGAIWSANIHDCIDEKMWPLMGGGYHVIHHLSNRHNYGLYTIWMDWMFGTLSHPVSNPTKPN* 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0373 286 PANTHER STEROL DESATURASE 27 276 - -
Vvi1g0373 286 Pfam Fatty acid hydroxylase 145 274 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0373 Vvi-Chr1 3530965 3547664 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0373 17 279 Lipid Metabolism Gene Families AT3G02580 62.357 4.33e-127 361