Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0371 ATGAAGAGTCAAAACCAAAATTCACTGGCCACAACTATCAATCTCCTTGGTTCACGATGGAATCCTCTCCATCTCTTTTCTTGTTTCTTCTTCTTTGCATTTGGTCTAACCTTTGGAATCATACTCAGTTTCAATCTCAAAAACTTCTCATTTAATCTCCAAGTCACTCAATCATCCCCCTCCCCATCAGCATCAGCATCAGCACCACCCCCATCCCCACTGGTTTCCCCATTGCCAGCATCAACCTATCCCACAAATGAAACTTCAAAAGCCGGCCGTCGCATAGGACTGAGCGAATATATGAAGCCGCCTAATGCTATGCACGACATGGATGATGAGGAGTTGCCATGGAGGGCTTCAATGGCTCCTCAGATTCGTGAGTTTCCATTCAAAAGAGTTCCCAAGGTTGCTTTCATGTTCTTGACCAAGGGGCCGTTACCACTGGCTCCTCTGTGGGAGTTGTTCTTCAAAGGGCATGAAGGGCTCTACTCAATTTATGTGCACTCACATCCATCATTCAACGAAACCGAGCCGGAAAATTCAGTGTTTCATGATCGAAGAATTCCCAGTAAGGAAGTTCAATGGGGAAAGTTTAACATGATTGAAGCTGAACGCCGTCTACTAGCCAATGCTCTCCTTGATTTCTCAAACTACCATTTTGTTCTCCTCTCAGAATCATGCATACCCCTCTTCAATTTCTCAACCATCTACTCTTACCTCATGAACTCCACACGAAATTATGTACAGACCTATGATTTCCCTGGTCCAGTTGGCCGTGGCCGATACAAAGAGCAAATGTATCCAACAATCACAATTGAACAATGGAGAAAGGGGTCCCAGTGGTTTGCGGTGGATCGAAATCTAGCCACGGAAATAATCTCTGACCAAACTTATTTTCCCATATTCCAAAAGCACTGCAAGTCTTCATGCTATGCTGATGAACACTACTTGCCAACATTTGTGGGTATAAAATTTTGGGAGAGGAGTGCAAATCGAAGCTTGACTTGGGTTGATTGGTCAAGGGGTGGGGCTCACCCAGCTAGGTTCATGAGGTGGGACGTGACCATTGAGTCTTTGAAGAGGTTGAGGAGTGAGGGTAGATGTGACTACAATGGGAAGAGCACCAATATCTGTTTCTTGTTTGCAAGGAAGGTCATGCCAAGCGCTTTGGAGAGGCTGTTGAGGTTTGCACCTAAGGTCATGCACTTCAATTCTTAG 1218 0.4516 MKSQNQNSLATTINLLGSRWNPLHLFSCFFFFAFGLTFGIILSFNLKNFSFNLQVTQSSPSPSASASAPPPSPLVSPLPASTYPTNETSKAGRRIGLSEYMKPPNAMHDMDDEELPWRASMAPQIREFPFKRVPKVAFMFLTKGPLPLAPLWELFFKGHEGLYSIYVHSHPSFNETEPENSVFHDRRIPSKEVQWGKFNMIEAERRLLANALLDFSNYHFVLLSESCIPLFNFSTIYSYLMNSTRNYVQTYDFPGPVGRGRYKEQMYPTITIEQWRKGSQWFAVDRNLATEIISDQTYFPIFQKHCKSSCYADEHYLPTFVGIKFWERSANRSLTWVDWSRGGAHPARFMRWDVTIESLKRLRSEGRCDYNGKSTNICFLFARKVMPSALERLLRFAPKVMHFNS* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0371 405 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 49 394 IPR044174 GO:0016757
Vvi1g0371 405 MobiDBLite consensus disorder prediction 60 89 - -
Vvi1g0371 405 MobiDBLite consensus disorder prediction 64 78 - -
Vvi1g0371 405 Pfam Core-2/I-Branching enzyme 136 362 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0371 Vvi-Chr1 3519841 3521708 Dispersed/Tandem