Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0356 ATGTTGCAGGCTCTCCTCTCCCCCACGCACATGGCGGTTCCCGCCTCACGTGCCGACACAAGGGGCCTCCGTCTCTACTGTCCACCACTTCTTCTCCCGGCACCTCAGCCTCCTAGCAATTGTCGCTCCCCACGTCTCCGATCAGTCCCCGCCGTGAGGAGCGCCAGTGGACTTGCTTTTGATTTCAAAGGCGGAAAAGGAATGAGTGGGTTCCTTGATGTTGAGCTCAAAGTCCGGGATTATGAATTGGATCAATATGGTGTTGTAAACAATGCTGTTTATGCAAGTTATTGTCAACATGGTCGGCATGAGCTTCTGGAAAAGATTGGTCTCAATGCTGATGCTGTTGCTTGCATTGGTGACGCTGTAGCACTTTCAGAGCTGACACTCAAATTCCTTGCACCTCTGAGAAGTGGAGACAGGTTTGTGGTGAAGGTGAGGGTCTCTGATGCCTCAGCTGCTCGCTTATACTTTGAACACTTCATCTTCAAGCTCCCAAATGAAGAGCCCATCTTGGAAGCTAGGGCCACAGGAGTATGTCTCGACAAAAACTACCGTCCCGTTCGAATACCAACAGAGATAAGATCTATATTGGTTCAATTCCTACGACATGAGGAATCCCATTAA 627 0.4976 MLQALLSPTHMAVPASRADTRGLRLYCPPLLLPAPQPPSNCRSPRLRSVPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLEKIGLNADAVACIGDAVALSELTLKFLAPLRSGDRFVVKVRVSDASAARLYFEHFIFKLPNEEPILEARATGVCLDKNYRPVRIPTEIRSILVQFLRHEESH* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0356 208 Pfam Thioesterase superfamily 86 169 IPR006683 -
Vvi1g0356 208 PANTHER 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER 19 206 - -
Vvi1g0356 208 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 68 204 IPR029069 -
Vvi1g0356 208 FunFam acyl-acyl carrier protein thioesterase ATL3, chloroplastic 62 202 - -
Vvi1g0356 208 CDD 4HBT 74 182 - -
Vvi1g0356 208 Gene3D Hotdog Thioesterase 65 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0356 Vvi-Chr1 3358934 3365226 Tandem