Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0355 ATGGAGGGAGTTGGGGAAAAGAGTAAGAGCGACGACAAGAAGAAAATGATGGTGTGCATAGATGAAAGCGAGTACAGTCACCACGCCCTCAATTGGGCTCTTGAAAATCTTCGCGATTCCCTCTCCAACTTCCAACTCATCGTCTTCACTGTACAGTCCCTTTCTGATTTCACCTATATCCACGCTTCCACTCTGGGCGTTGCTCCACCAGATCTGATTACAGAAGTCCAGGAAAGGCAAAAGAAGGTTGCATTCGCTCTTCTGGAGCGAGCTAAGGAAATATGTGCTCAGTGTGGGATTGTTGCAGAGACAATTACAGAAGTTGGAGATCCTAAAGAGGCTATATGTAAGGCAGTAGAAAAGTTGAACATCCAGTTCCTTGTTCTAGGCAGCCATGGTCGTGGTGCTTTTGGGAGGGCTTTTCTTGGAAGTGTTAGCAATTACTTGCCCAGTCCTTGTTGTGCGGAAACCGGAGCTCTCCTCTCCCCCACGCACATGGCGGTTCCCGCCTCACGTGCCCACACAAGGGGCCTCCGTCTCTATCGTCCACCACTTCTTCTCCCGGCACCTCAGCCTCCTAGCAATTGTCGCTCCCCACGACTCCGATCAGTCCCCGCCGTGAGGAGCGCCAGTGGACTCGCTTTTGATTTCAAAGGCGGAAAAGGAATGAGTGGGTTCCTTGATGTTGAGCTCAAAGTCCGGGATTATGAATTGGATCAATATGGTGTTGTAAACAATGCTGTTTATGCAAGTTATTGTCAACATGGTCGGCATGAGCTTCTGGAAAAGATTGGTGTCAATGCTGATGCTGTTGCTCGCACTGGTGATGCATTAGCACTTTCAGAGCTGACACTCAAATTCCTTGCACCTCTGAGAAGTGGAGACAGGTTTGTGGTGAAGGTGAGGGTCTCTGATTCCTCAGCTGCCCGCTTATACTTTGAACACTTCATCTTCAAGCTCCCAAATGAAGAGCCCATCTTGGAAGCTAGGGCCACAGCAGTATGTCTCGACAAAAACTACCGTCCCGTTCGAATACCAACAGAGATAAGATCTAAATTGGTTCAATTCCTACGACATGAGGAATCCCATTAA 1092 0.4872 MEGVGEKSKSDDKKKMMVCIDESEYSHHALNWALENLRDSLSNFQLIVFTVQSLSDFTYIHASTLGVAPPDLITEVQERQKKVAFALLERAKEICAQCGIVAETITEVGDPKEAICKAVEKLNIQFLVLGSHGRGAFGRAFLGSVSNYLPSPCCAETGALLSPTHMAVPASRAHTRGLRLYRPPLLLPAPQPPSNCRSPRLRSVPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLEKIGVNADAVARTGDALALSELTLKFLAPLRSGDRFVVKVRVSDSSAARLYFEHFIFKLPNEEPILEARATAVCLDKNYRPVRIPTEIRSKLVQFLRHEESH* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0355 363 CDD 4HBT 229 337 - -
Vvi1g0355 363 Pfam Thioesterase-like superfamily 236 352 - -
Vvi1g0355 363 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 223 359 IPR029069 -
Vvi1g0355 363 Gene3D Hotdog Thioesterase 220 357 - -
Vvi1g0355 363 FunFam acyl-acyl carrier protein thioesterase ATL3, chloroplastic 217 357 - -
Vvi1g0355 363 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 149 - -
Vvi1g0355 363 Gene3D HUPs 8 153 IPR014729 -
Vvi1g0355 363 PANTHER 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER 165 361 - -
Vvi1g0355 363 CDD USP_Like 18 149 - -
Vvi1g0355 363 Pfam Universal stress protein family 14 149 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0355 Vvi-Chr1 3341421 3358024 Dispersed/Tandem