Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0354 ATGGAGGGAGTTGGGGAAAAGAGTAAGAGCGACGACAAGAAGAAAATGATGGTGTGCATAGATGAAAGCGAGTACAGTCACCACGCCCTCAATTGGGCTCTCGAAAATCTTCGCGATTCCCTCTCCAACTTCCAACTCATCGTCTTCACTGTACAGTCCCTTTCTGATTTCACCTATATCCACGCTTCCACTCTGGGCGTTGCTCCACCAGATCTGATTACAGCAGTCCAGGAAAGGCAAAAGAAGGTTGCATTCGCTCTTCTGGAGCGAGCTAAGGAAATATGTGCTCAGTGTGGGATTGTTGCAGAGACAATTACAGAAGTTGGAGATCCTAAAGAGGCTATATGTAAGGCAGTAGAAAAGTTGAACATCCAGTTCCTTGTTCTAGGCAGCCATGGTCGTGGTGCTTTTGGGAGGGCTTTTCTTGGAAGTGTTAGCAATTACTGCATGCATAATGCTAAGTGCCCAGTCCTTGTTGTGCGGAAACCGGAGTGA 495 0.4727 MEGVGEKSKSDDKKKMMVCIDESEYSHHALNWALENLRDSLSNFQLIVFTVQSLSDFTYIHASTLGVAPPDLITAVQERQKKVAFALLERAKEICAQCGIVAETITEVGDPKEAICKAVEKLNIQFLVLGSHGRGAFGRAFLGSVSNYCMHNAKCPVLVVRKPE* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0354 164 CDD USP_Like 18 160 - -
Vvi1g0354 164 Gene3D HUPs 8 164 IPR014729 -
Vvi1g0354 164 PRINTS Universal stress protein signature 13 31 IPR006015 -
Vvi1g0354 164 PRINTS Universal stress protein signature 121 133 IPR006015 -
Vvi1g0354 164 PRINTS Universal stress protein signature 139 161 IPR006015 -
Vvi1g0354 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 14 161 - -
Vvi1g0354 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 163 - -
Vvi1g0354 164 FunFam Universal stress protein A-like protein 9 164 - -
Vvi1g0354 164 Pfam Universal stress protein family 14 161 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0354 Vvi-Chr1 3339155 3340515 Tandem