Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0347 ATGGAACTTTCCATGTCCTCCAGATTCCGATCATCGGAACTCCATCTCTTTTGCCGGGCACTTGGTACTCCCCTCAAAGTTCGGCCATACCATCACTTGCCCATTATTCTCCGCCCAAAACTGAAACCCACCCCGATTGTTTCCGTCCCCAAAACTCGTGTCCTGATCACCGCCAAGAAAAGGTCATCGATTGAAGGTGTCAGCGAAGAGATGAATGCGATCGCTTCACAGAGCTTGGACTCTGCATCCGCTCGCAGGCGGGTTCGATCCGCTTTTCTGGACGTGCAGCAACAGCTGGACCATTGCTTGTTCAAGATCGCTCCTACTGGGATCAGAACTGAGGAGTGGTATGAAAAGAATTCAAGGGGCTTGGAAATTTTCAGCAAATGCTGGTTGCCTAAACCGGGAATTCGAACGAAAGGCTCCTTGTGTTTCTGCCATGGATATGGTGACACTTGCACTTTCTTCTTTGAAGGTATTGCGAAGCAAATTGCCGCTTCTGGGTATGCTGTATATGCTTTGGACTATCCAGGTTTTGGTCTATCTGACGGATTACACGGTTATATCTCAAGCTTTGATGAGCTAGTTGATGATGTTATTGACCATTATACAAAAATCAAAGGAAGACCAGAATTGAGAGGGTTGCCTCACTTTATATTGGGGCAATCAATGGGAGGAGCTGTTACTCTCAAAGCTCATCTAAAGGAACCAAGTGGATGGGATGGAGTGATTCTTGTAGCCCCAATGTGTAAAAAGATGTGA 762 0.4672 MELSMSSRFRSSELHLFCRALGTPLKVRPYHHLPIILRPKLKPTPIVSVPKTRVLITAKKRSSIEGVSEEMNAIASQSLDSASARRRVRSAFLDVQQQLDHCLFKIAPTGIRTEEWYEKNSRGLEIFSKCWLPKPGIRTKGSLCFCHGYGDTCTFFFEGIAKQIAASGYAVYALDYPGFGLSDGLHGYISSFDELVDDVIDHYTKIKGRPELRGLPHFILGQSMGGAVTLKAHLKEPSGWDGVILVAPMCKKM* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0347 253 Pfam Serine aminopeptidase, S33 139 251 IPR022742 -
Vvi1g0347 253 PANTHER PHOSPHOLIPASE-RELATED 87 251 - -
Vvi1g0347 253 PRINTS Alpha/beta hydrolase fold signature 219 232 IPR000073 -
Vvi1g0347 253 PRINTS Alpha/beta hydrolase fold signature 168 183 IPR000073 -
Vvi1g0347 253 Gene3D alpha/beta hydrolase 111 252 IPR029058 -
Vvi1g0347 253 SUPERFAMILY alpha/beta-Hydrolases 103 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0347 Vvi-Chr1 3273263 3277948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0347 56 251 Acyl Lipid Metabolism Gene Families AT1G77420 70.918 5.55e-104 305