Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0346 ATGTCACTCCTGAATCAGCTCTTCAACAGAGGAATTCTTGGCGCGAAATGCAAAACGTGCTTGAATTTGGCAATCTCTCGCATTAAATTGCTGCAAAACAAGAGAAGTTTGCATCTTAAACAGATGCGCAAGGAGATAGCTCAATTTCTGCAGACAGGCCAAGAAGCAATAGCTCGAATACGGGTGGAGCATGTTATACGAGAACAAAACATATGGGCTGCATATGAGATTCTGGAGCTGTTTTGTGAATTTGTTCTCGCACGTGTTCCTATTCTTGAAACTCAGAGGGAGTGCCCTACAGAATTGCGAGAAGCTGTTGCTAGTATAATTTTTGCTGCTCCCAGATGCTCAGATGTGCCAGATTTATTGCAGATCAAGAACTTGTTTGCTGCAAAATATGGGAAGGAGTTCATATTGGCTGCCTCTGAGCTGCGTCCTGATACAAGCGTCAACCGTGCAATAATAGAAAAGCTTTCAGTAAGCACTCCAACTGGAGAAGCAAAGCTAAAGCAATTGAAGGAAATCGCTCAGGAGTACAATCTGGAATGGGATTCTTCTAACACTGAAGCAGAATTCAGCAAAAAACACGAGGACTTGCTGGATGGTTCAAAGCAAGTATGCAGTGGAGGTGCAATTTCTCAAGCTCCCTCCATACAAAGCTCTCTCCAATGTCCACCTACCAGTGAGCCAAATGTTATTTCGAGTAGGACTATTCAACAGGGAATCCAAGCCCTTCACTCTCCCAACACGGCCAGCAAGAAGTCATTGTCTAGTCCTGATGAAGTTGAACATTCGATTAAGAGTTACAATGCAGGACAAGTAAGTGATTCTAAGGAGACAAGATCACAATCATCTGACATCTTGGAGAGAGCTCGAGCTGCTATTGCCTCTGCAGACCGTGCATCAGCTGCTGCCCGTGCAGCTGCTGAGCTGGCAAATATTACATTTGGACCATGGAAGCTAGAGGAAGGGCAGTCTCCAAAGGGCTAA 990 0.4485 MSLLNQLFNRGILGAKCKTCLNLAISRIKLLQNKRSLHLKQMRKEIAQFLQTGQEAIARIRVEHVIREQNIWAAYEILELFCEFVLARVPILETQRECPTELREAVASIIFAAPRCSDVPDLLQIKNLFAAKYGKEFILAASELRPDTSVNRAIIEKLSVSTPTGEAKLKQLKEIAQEYNLEWDSSNTEAEFSKKHEDLLDGSKQVCSGGAISQAPSIQSSLQCPPTSEPNVISSRTIQQGIQALHSPNTASKKSLSSPDEVEHSIKSYNAGQVSDSKETRSQSSDILERARAAIASADRASAAARAAAELANITFGPWKLEEGQSPKG* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0346 329 PANTHER IST1 FAMILY MEMBER 16 312 IPR005061 GO:0015031
Vvi1g0346 329 MobiDBLite consensus disorder prediction 246 286 - -
Vvi1g0346 329 Pfam Regulator of Vps4 activity in the MVB pathway 18 181 IPR005061 GO:0015031
Vvi1g0346 329 MobiDBLite consensus disorder prediction 246 281 - -
Vvi1g0346 329 Gene3D - 5 193 IPR042277 -
Vvi1g0346 329 FunFam IST1-like protein isoform A 6 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0346 Vvi-Chr1 3265823 3269997 Dispersed/Transposed