Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0333 ATGGCTAATTTTTGTGTAACAGGAGGAACTGGGTTCATAGCGGCTTACCTGGTTAAGCGTTTGCTGGAAGATGGTCACTTCGTACGAACCACAGTCCGAGACCCAGGGGATGTTGAGAAAGTTGGTTTTCTTTGGGAGTTGAGTGGAGCCAAGGAGAGACTGAAGATTATGAAAGCTGATCTGATGGTGGAAGAAAGTTTCGATGAGGCTGTTCAAGGCGTTGATGGGGTCTTCCACACTGCCTCTCCAGTTCTTGTGCCATATGATGAGAACATTAAGGCAACTTTGATTGATCCTTGTATAAATGGAACGTTGAATGTGCTGAGATCATGCTCAAAATCTAGCAGTCTGAAAAGGGTTGTGTTGACCTCTTCCTGCTCTTCCATAAGATACCGAGATGATGTCCAACAAGTTTCTCCTCTTAATGAGTCTCACTGGAGTGATCCTGAATACTGCAAACGCTACAATCTGTGGTATGCATATGCAAAAACAGAAGCAGAGAAAGAGGCATGGAAATTAGCAAAGGAAAATGGAATAGACCTAGTGGCGGTGAACCCATCTTTTGTGGTTGGTCCCTTGCTTGCTTGGCAGCCAACCAGCACACTGCACATGATACTGTCCGTAGTTAAAGGTTTATGTGGGGAATACCCAAACACGACAGTGGGGTTTGTCCACATAGATGACGTGATTGCTGCACACATATTAGCTATGGAAGAAAGCAAAGCATCAGGCAGGCTTGTATGCTCAAGCTCAGTAGCTCACTGGTCCCAGATCATTGACATGCTCAGGGCCAAATATCCAGCCTATCCATTTGAAAGCAAGTGTAGCAGCAGCGAAGGAGATAACCACCCACATAGCATGGACACCAGCAAAATTATTCAGTTGGGGCTCCCTCCCTTCAAAACGCTTGCTCAAATGTTCGATGACTGCATCAAAAGTTTCCAAGACAAAGGTTTTCTGTAA 963 0.4528 MANFCVTGGTGFIAAYLVKRLLEDGHFVRTTVRDPGDVEKVGFLWELSGAKERLKIMKADLMVEESFDEAVQGVDGVFHTASPVLVPYDENIKATLIDPCINGTLNVLRSCSKSSSLKRVVLTSSCSSIRYRDDVQQVSPLNESHWSDPEYCKRYNLWYAYAKTEAEKEAWKLAKENGIDLVAVNPSFVVGPLLAWQPTSTLHMILSVVKGLCGEYPNTTVGFVHIDDVIAAHILAMEESKASGRLVCSSSVAHWSQIIDMLRAKYPAYPFESKCSSSEGDNHPHSMDTSKIIQLGLPPFKTLAQMFDDCIKSFQDKGFL* 321
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0333 320 CDD FR_SDR_e 5 297 - -
Vvi1g0333 320 Gene3D - 2 320 - -
Vvi1g0333 320 FunFam Dihydroflavonol reductase 1 320 - -
Vvi1g0333 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 315 IPR036291 -
Vvi1g0333 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 311 - -
Vvi1g0333 320 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0333 Vvi-Chr1 3147480 3149140 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0333 5 319 Miscellaneous Gene Families AT5G19440 42.593 2.30e-81 248