Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0330 ATGGCTTCCTCTTATCTTCTACTTGTGGTTTCGATTCTATGCATCTATGGAGGATGCGGCGCGTTGGCGGCAATTCCTGCAAAGATTGGCAAAGGGTATCGTCTGATATCCATTGAAGAGACTGCTAATGGAGGTCTTCTGGGCCATCTTCAAGTCAAGCAAAAGAACAACATCTACGGTGCCGATATCCCACATTTGCAGCTCCATGTCAAGCATGAGACGCAAGATCGTTTGAGGGTGCACATCACCGACGCAGAGAAGCAGAGATGGGAAGTTCCGTACGATCTGTTGCCCAGAGAGAAGCCTCTACCATTGAGACAGGCCATTGGAAGATCAAGGAAAACTCTATCAACACCTACTGACTACCCGGGTTCTGAGCTCATATTCAGCTACACTACAGACCCATTTGGGTTTGCAGTGAGAAGAAAATCCACCGGCGAAACCCTTTTCAATACGACTTCCGATGACTCAGACCGGTATGGTAATATGGTGTTTAAGGACCAGTACCTCGAAATTTCCACCAAATTGCCTAAAGATGCCTCACTGTACGGGTTGGGGGAGAACACTCAACCCCATGGAATCAAACTGTATCCAAATGATCCCTATACTCTGTATACAACAGATATATCGGCCATTAATCTAAATGCAGATCTGTACGGGTCTCATCCAGTGTACATGGATCTCAGGAACACCGGTGGGAAAGCTTATGCACACTCAGTCTTGTTGCTGAACAGCAACGGGATGGATGTGTTCTACAAGGGAAGTTCATTGACATACAAGGTGATTGGGGGTGTCTTTGATTTCTACTTCTTTGGTGGTCCAACGCCACTATCTGTTGTTGATCAGTACACTAGCTTGGTGGGTAGGCCTGCTCCAATGCCCTACTGGTCTCTAGGATTCCACCAATGTAGATGGGGTTACCATAATCTATCTGTAGTTGAAGATGTGGTTGAGAACTACAAAAAGGCTCAAATCCCGCTTGATGTGATATGGAATGATGATGATCATATGGATGGGCACAAGGACTTCACTCTCAACCCTGTCAACTACCCTCGCCCAAAGCTGTTGGAGTTCCTAAACAAAATACATGATCGGGGCATGAAGTACATTGTTATCATTGACCCTGGAATTGGTGTGAATTCAACCTATGGTGTGTATCAAAGAGGTATGGCCAATGATGTTTTTATCAAGTATGATGGTGAACCCTTCTTAGCTCAAGTCTGGCCTGGGCCTGTTTACTTCCCTGACTTCCTTAACCCAAAAACTGTTTCATGGTGGGGTGATGAAATTCGGCGGTTCCATGAACTTGTTCCTGTTGATGGTCTTTGGATTGATATGAATGAGGCTTCGAATTTCTGTACTGGGAAGTGCACAATCCCAAAGGGTAAGGTGTGCCCCAGTGGAACTGGACCTGGGTGGATATGTTGCTTGGATTGCAAGAACATAACAAAAACAAGATGGGACGACCCACCTTATAAGATCAATGCTTCAGGATTGGAGGTTCCAATTGGGTACAAAACCATAGCCACCAGTGCAGTTCACTACAATGGGGTTTTGGAGTATGATGCACATAGTCTCTATGGTTTCTCTCAATCCATTGCGACCCATAAGGGCCTCCAAGGGCTTGAGGGCAAACGCCCCTTCATATTATCCCGCTCTACTTATGTTGGGTCAGGCAAATATGCTGCCCATTGGACGGGTGACAATAAGGGCACTTGGGATGATATAAAGTATTCGATTTCTACTATGCTGAACTTTGGTATATTTGGGGTGCCAATGGTTGGTTCAGACATCTGTGGATTCTATCCAGCACCCACAGAGGAGCTTTGCAACAGATGGATTGAGCTAGGTGCTTTCTACCCTTTCTCAAGGGATCATGCAAACTACTATTCCCCAAGACAGGAGCTTTATCAATGGGACTCGGTGGCTAAGTCTGCTCGAAATGCTCTGGGAATGAGGTACAAGCTCCTTCCATATCTGTACACATTGAACTATGAGGCACATATCAGTGGTGCCCCAATTGCCAGGCCGCTTTTCTTCACATTCCCAACTTTCTCCAAGTGTTATGAGGTGAGCACCCAGTTCTTGCTAGGTAGCGGTGTCTTGGTGTCTCCAGTGCTTGACAAGGGGAAAACCAAGGTCAATGCTCTCTTTCCTCCTGGTACCTGGTACAGTTTATTTGATTTGAAGGAGACCATTGTATCAGAGGGTGACTACCGTTCTCTAGATGCACCATTACATGTGATCAATGTTCATGTGTACCAAAATACCATACTCCCAATGCAGCAGGGTGGACTGATTTCGAAGGAAGCCAGGATGACACCCTTCACTCTCATTGTAACCTTCCCAGCAGGAGCAACTGAGGGACATGCTGAAGGGAAACTCTACCTTGATGATGATGAGCTCCCTGAAATGACTCTTGGAAATGGATTTTCCACATATGTTGATTTACATGCAACTGTGGAGAATAAAATGGTGAAGGTATGGTCAGATGTTGCGGAGGGCAAATATGCTTTGGAGAAGGGTTGGACCATAGAGAAGATAACAGTGTTGGGATTGAGTGGAAGCGGAGAGTCATTTGCTCTCGAGGTTGATGGAAGTTCAGTGTCAGATGTCTCCCATGTACAGCTTACTGCATCTGAACAGCATGTAGCCACTGATAAGTTAGAAGATGAAGGAGATACGAGGAAGAGCATGATGATAGAAATTCAGGGATTGGACCTGCCAGTAGGGAAAAACTTTGCCATGTCCTGGAAAATGGGCGTCCATGGTTAA 2775 0.4587 MASSYLLLVVSILCIYGGCGALAAIPAKIGKGYRLISIEETANGGLLGHLQVKQKNNIYGADIPHLQLHVKHETQDRLRVHITDAEKQRWEVPYDLLPREKPLPLRQAIGRSRKTLSTPTDYPGSELIFSYTTDPFGFAVRRKSTGETLFNTTSDDSDRYGNMVFKDQYLEISTKLPKDASLYGLGENTQPHGIKLYPNDPYTLYTTDISAINLNADLYGSHPVYMDLRNTGGKAYAHSVLLLNSNGMDVFYKGSSLTYKVIGGVFDFYFFGGPTPLSVVDQYTSLVGRPAPMPYWSLGFHQCRWGYHNLSVVEDVVENYKKAQIPLDVIWNDDDHMDGHKDFTLNPVNYPRPKLLEFLNKIHDRGMKYIVIIDPGIGVNSTYGVYQRGMANDVFIKYDGEPFLAQVWPGPVYFPDFLNPKTVSWWGDEIRRFHELVPVDGLWIDMNEASNFCTGKCTIPKGKVCPSGTGPGWICCLDCKNITKTRWDDPPYKINASGLEVPIGYKTIATSAVHYNGVLEYDAHSLYGFSQSIATHKGLQGLEGKRPFILSRSTYVGSGKYAAHWTGDNKGTWDDIKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIELGAFYPFSRDHANYYSPRQELYQWDSVAKSARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFTFPTFSKCYEVSTQFLLGSGVLVSPVLDKGKTKVNALFPPGTWYSLFDLKETIVSEGDYRSLDAPLHVINVHVYQNTILPMQQGGLISKEARMTPFTLIVTFPAGATEGHAEGKLYLDDDELPEMTLGNGFSTYVDLHATVENKMVKVWSDVAEGKYALEKGWTIEKITVLGLSGSGESFALEVDGSSVSDVSHVQLTASEQHVATDKLEDEGDTRKSMMIEIQGLDLPVGKNFAMSWKMGVHG* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0330 924 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 46 178 IPR031727 -
Vvi1g0330 924 FunFam Alpha-glucosidase 1 656 755 - -
Vvi1g0330 924 SUPERFAMILY Glycosyl hydrolase domain 673 753 - -
Vvi1g0330 924 Pfam Galactose mutarotase-like 180 248 IPR025887 -
Vvi1g0330 924 Pfam Glycosyl hydrolases family 31 269 759 IPR000322 GO:0004553|GO:0005975
Vvi1g0330 924 SUPERFAMILY (Trans)glycosidases 279 671 IPR017853 -
Vvi1g0330 924 ProSitePatterns Glycosyl hydrolases family 31 active site. 441 448 IPR030458 -
Vvi1g0330 924 FunFam Maltase-glucoamylase, intestinal 290 655 - -
Vvi1g0330 924 Gene3D - 656 754 IPR013780 -
Vvi1g0330 924 CDD GH31_MGAM_SI_GAA 288 668 - -
Vvi1g0330 924 Gene3D - 757 923 IPR013780 -
Vvi1g0330 924 PANTHER ALPHA-GLUCOSIDASE 50 873 - -
Vvi1g0330 924 CDD GH31_N 170 288 - -
Vvi1g0330 924 Gene3D Glycosidases 290 655 - -
Vvi1g0330 924 SUPERFAMILY Galactose mutarotase-like 22 276 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vvi1g0330 924 Gene3D glycosyl hydrolase (family 31) 27 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0330 Vvi-Chr1 3127824 3131985 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0330 29 923 Glycoside Hydrolase AT1G68560 73.996 0.0 1429