Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0325 ATGGGAGGTATGGAGAAGAAAGGCAGTCATGGGGGAAGGACTAAGGGTGGATTGATAACAATGCCCTTCATCTTTGCAAATGAGGCCTGTGAGAAGTTGGCCGTGGTGGGTTTCAGTGCAAATATGATCACCTACTTGACACAGCAGCTGCATCTGCCGTTAACTAAAGCTGCAAACACCATCACCAACTTTAGCGGGACTGCAAGCTTGACGCCGTTGCTCGGAGCTTTCATCTCCGATGCATACGCCGGCCGGTTCTGGACTATTACAGTGGCTTCCATCTTATGGCAAATGGGGATGACAAGCTTAACACTCTCAGCAGTGCTTCCACAACTGAGGCCACCTCCATGTAAGGGTGAACATCAAGTCTGCCAAGAGGCTGATGGTGGGCAATTGGCAATCCTCTACGGTTCTCTGCTGCTGACAGCTTTAGGGGCTGGAGGGATTCGACCCTGCGTGGTGGCATTCGGTGCCGACCAGTTTGATGAGACCGATCCAAAGGAGAAGACAAAGACATGGAACTTTTTTAATTGGTACTATTTTGTGATGGGGGCATCCATACTTGTGGCTGTGACTGTGCTTGTTTACATTCAAGATAATGTTGGATGGGGGTGGGGACTTGGAATCCCAACCACGGCCATGTTTCTTTCAATTATTACCTTTGTTGTGGGGTATCCGCTTTACAGGAATCTGGATCCTGTTGGGAGTCCATTTACTCGCTTGTTACAAGTGTGTGTGGCTGCTTCCAAGAAGAGAAATCTACGTATGGTTTCTGATCCAAATTTACTCTATGAGAACGACGAACTTGATGCCTCCATTTCTGCAGCTGGGAAGCTTCTTCATACTAATGAATTGAAATTTCTTGACAAGGCGGCCATTGTGACCGAAGAAGATGACATCAAATCTTCGCAAGCACCAAATCTGTGGAGATTGAATACCGTTCACAGAGTTGAAGAACTAAAATCTGTGATCCGAATGGGGCCTATATGGGCATCCGGAATCCTCCTCATCACAGCCTATGCTCAACAGGGCACTTTCTCCCTCCAACAAGCCCGTACCATGGACAGACGCCTCATAAATTCCTTCCAAATTCCTCCTGGCTCCATGACTGTCTTCTCCATGTCCTCCATGCTCATAACAATTGCACTCTACGACCGGTTACTCATTCGTGTAGCCCGCCGGTTCACCGGCCTTGACCGGGGCATCACCTTCCTGCAGAGGATGTGGATTGGGTTCGTAATCTCTATCGTAGCCACTCTAGTCGCCGGGTTCGTGGAAGTGAAGCGGAAACAGGCAGCCTCGGCTTATGGGCTCGTCAATAGCCCTAAGTCCACCATCCCCATTTCGGTTCTCTGGCTGGTGCCGCAGTATAGCCTTCATGGGATTGCGGAAGCTTTCATGTCCATAGGACACCTTGAGTTTTTCTATGACCAAGCACCAGAAAGCATGAAGAGCACAGGCAGTGCATTGTTTTGGACGGCGATCGCGTTTGGGAATTTTGTCAGCACATTTCTTGTTTCTCTGGTGCACAAGTACAGTGCTGGCCCGGACGGATCAAATTGGCTTCCGGATGATAATTTGAATAAGGGGAAGTTGGAGAAGTTTTACTGGCTGCTCACATTGCTGCAAGTTGTGAATCTCATCTATTACTCATTCTGCGCCAAATTCTACACGTTCAAGCCCATCCAAATCCGTATGAAAGAAGTTGACACATCTGAAGAAGATGGAATACAGCTCACGAGTAGGGTTTAG 1752 0.4846 MGGMEKKGSHGGRTKGGLITMPFIFANEACEKLAVVGFSANMITYLTQQLHLPLTKAANTITNFSGTASLTPLLGAFISDAYAGRFWTITVASILWQMGMTSLTLSAVLPQLRPPPCKGEHQVCQEADGGQLAILYGSLLLTALGAGGIRPCVVAFGADQFDETDPKEKTKTWNFFNWYYFVMGASILVAVTVLVYIQDNVGWGWGLGIPTTAMFLSIITFVVGYPLYRNLDPVGSPFTRLLQVCVAASKKRNLRMVSDPNLLYENDELDASISAAGKLLHTNELKFLDKAAIVTEEDDIKSSQAPNLWRLNTVHRVEELKSVIRMGPIWASGILLITAYAQQGTFSLQQARTMDRRLINSFQIPPGSMTVFSMSSMLITIALYDRLLIRVARRFTGLDRGITFLQRMWIGFVISIVATLVAGFVEVKRKQAASAYGLVNSPKSTIPISVLWLVPQYSLHGIAEAFMSIGHLEFFYDQAPESMKSTGSALFWTAIAFGNFVSTFLVSLVHKYSAGPDGSNWLPDDNLNKGKLEKFYWLLTLLQVVNLIYYSFCAKFYTFKPIQIRMKEVDTSEEDGIQLTSRV* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0325 583 Pfam POT family 86 514 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vvi1g0325 583 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 557 - -
Vvi1g0325 583 SUPERFAMILY MFS general substrate transporter 19 555 IPR036259 -
Vvi1g0325 583 Gene3D MFS general substrate transporter like domains 5 565 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0325 Vvi-Chr1 3077136 3080340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0325 26 582 Organic Solute Cotransporters AT1G68570 72.939 0.0 847