Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0324 ATGGGGAACATGGCTCAGGAAGAAGAGAGCGTTAAAGCAACGCCTCTGGCAGCCATGGCGGAGGCTTTCGAGGAGCTATCGAAGTTGGTGAAGACATGCCCCTCATACCACCTTCGCTTGATAACCTTCTGTGACGCCTGCTCTCTCGTCTCGGTTCTCTTTGGCTGCCTTGGCATCGCTTTCAAATTCGCTGAGTTGGAGTACGTCTCCAAGATACGTGATCTTTTGGAAGCATCAAAAACATATGACACTTTAGAAGATATAATCGACCGTGATATAGAAAATAACACTGTGAGATCAGCAGGAAGCCATTCCCGAAATTTACGCCGAGTTAGGCAGGGTCTTGACCTCATCAGAGCTTTATTTGAACAATTTTTGTTATCCGATGATTTCTCTTTAAGGGAAGCAGCTTCCGCAGCTTATTCACAAGTTTGTGCACCATATCATACATGGGCTGTCAGGACGGCTGTTTCTGCTGGGATGTATGCTCTTCCAGTTAGGGAACAACTTCTGGTGAGGCTAAATGAAAATGGTCAATCAGCAGAGAAGCAGATGAGAAGGTACATTAATGCCTCACTTCCAGTTATAGCGTACATTGATGAACTGTACATGGCGAGGAATATCAGCTTGGATTGGTGA 639 0.457 MGNMAQEEESVKATPLAAMAEAFEELSKLVKTCPSYHLRLITFCDACSLVSVLFGCLGIAFKFAELEYVSKIRDLLEASKTYDTLEDIIDRDIENNTVRSAGSHSRNLRRVRQGLDLIRALFEQFLLSDDFSLREAASAAYSQVCAPYHTWAVRTAVSAGMYALPVREQLLVRLNENGQSAEKQMRRYINASLPVIAYIDELYMARNISLDW* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0324 212 Coils Coil 171 191 - -
Vvi1g0324 212 Gene3D Glycolipid transfer protein 7 212 IPR036497 -
Vvi1g0324 212 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 12 202 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vvi1g0324 212 FunFam Accelerated cell death 11 6 212 - -
Vvi1g0324 212 Pfam Glycolipid transfer protein (GLTP) 41 175 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vvi1g0324 212 SUPERFAMILY Glycolipid transfer protein, GLTP 36 212 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0324 Vvi-Chr1 3066338 3068717 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0324 14 212 Acyl Lipid Metabolism Gene Families AT4G39670 65.196 3.10e-100 288