Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0314 ATGGTGATGTTCAATAATGGTTTTGTTGACAAGAGTAAGGAAAGGCTGCCTCTGATAGGCAGCTTGGATGGAGTTGATGGTGAGGAAGGAAGTGGACGCATTTCTTTCAGTTGGCTGCTGAAAAAACTCAAGAACTTCTGGAATAGTGTTCAAGATGTTTCATGGAAAGCATGGGAAATGGGTCGCTCTGATCCTCGGAAAATCATATTTGCCATGAAAATGGGACTGGCATTGTCTCTTGTATCCCTGCTCATTTTCTGGAAGGAACCAGCTGATGTTGGGCAGTACTCAATCTGGGCAATTCTCACAGTCATTGTGATGTTTGAATTCAGCATAGGAGCAACCTTTATTAAAGGTTTTAATCGCGGGCTGGGGACACTATGCGCTGGAATACTTGCCTTTGGCTTTGCTGAGTTATCCGTGCTTGCAGGACCATGTGAAGAAGTGGTGATCGTTATAAGCATTTTCATTACAGGATTTTTCACAAGCTATTTGAAACTATACCCAACAATGGCGCCTTATGAGTATGGATTTCGAGTGTTCATTATGACATACTGCATCCTAATGATGGCCGGGAACAGAACTAGGGAATATAATCAGGCAGTTGTAATCCGATTAGTGCTAATTGCAGTTGGTGGTGGTGTTTGTTTCATCGTAAACATATGCTTTTACCCCATATGGGCAGGGGAGGATCTACACAGCTTGGTTGTGAAGAATTTCAAGGGAGTCGCTACTTCTCTGGAAGGATGTGTTAATGGGTACCTTAAATGTGTCCAATATGAGAGAGTTCCCCAAAAAATACATACCCACCAAGCTTCTGATGACCCACTATCCAATGGCTACCGATCAGTTGTGGAATCTACCAGCCGGGAGGCTACTCTGTTGGGGTTTGCCATCTGGGAACCGCCTCATGGCCGGTATAGAATGTTTAACTATCCTTGGAAAAACTATGTCAAATTAAGCGGTGCATTGAGGCATTGTGCATTCATGGTTATGGCGCTGCACGGATGCATTCTTTCTGAAATTCAGGCCCCTGCAGAGAGGAGACTGGTCTTTCAAAGTGAGCTTCAGAGAGTTGGTACAGAAGGTGCTAAAGTTCTACGCGAGCTCGCAAACAAAGTAGAGAAGATGGAAAAACTAAGCCCTGGAGACATTCTTAAAGAGGTGCATGAGGCAGCAGAGCAGCTGCAAAAGAAGATAGACCAGAGGTCATATCTGCTAGTAAATTCAGAGAGCTGGTTGATTGGACGGACTAGAGAGGTGGAAGATCCTGTGAACCTTGAGGATGTGAAGGATAATGAAAATGTGAAGTTGGGGTCTAAGTCCCTTAGTGAAACTGTGCTTGAGATAAGGTCATTCCTAGCTTGGCCGCCCTCCGGTGACGTGTTTAGGAAACAATCCCCTTGGCCCTCACGTCCTTCATTCATTGCTGATGCAGTCATTAGGGAAGATGAAATTAGAACTTATGAAAGTGCAAGTGCCTTGTCGTTGGCCACATTTGTTTCACTTCTCATTGAATTTGTTGCCAGGCTCCAAAATGTTGTTGACTCCTTCCAAGAACTAAGTGAGAAAGCAGAATTTAGAAAACCCAGTGTTTACTTTTCCCATCCACTGTACCAAGGAGTATTTCTCAGAAAAATGGCAGCTAAAGTCGGATCGTTTCGGCATAGTTTTGTGGAGAGGAGTAAGGAGAGGCTGCTGTCTAGGAAGGGTTACTCAGAGTTTGGGCTGAATAGCTCAGATGGAGGTGATGAACCAGTTAAATGCCTGTGTTTTCGTTGGAGGACTGATGCAATTATTAATTTTTGGAATGGTTTACAAGACACTGCGAGTAGGCTTTTTGAAATGGCTCGGTCAGATCCTCGAAAGGTCTATTTTGCAGCCAAGATGGGGTTGTCGCTAGCGATTGTTTCACTATTTATATTCCTCAAAGAACCCCTTAAGGATGTTAGCCAGTATTCAATCTGGGCAATTCTTACAGTTGTTGTGGTTTTCGAATTCAGTGTAGGAGCGACTCTTAGTAAGGGATTTAATCGTGCTTTGGGAACATTCTCTGCTGGTGGACTTGCTCTGGGCATCGCAGAGCTATCTATGTTGACTGGAGCTTTGGAAGAAGTTATAATTATAATCAGTATATTTATTGCAGGATTTTGTGCAAGTTATTGCAAACTGTATCCAGAAATGAAGCCTTATGAATATGGATTTCGGGTATTCTTGTTGACATTTTGTATTGTATTGGTGTCGGGGAGCACTTCATCAAAATTTCTGCAAACAGCTCTCTATAGGTTGTTATTTATTGGGGTCGGTGCCGGCATTTGTTTGGTTGTAAATACATGTATTTGCCCCATTTGGGCAGGCGAGGATCTACACAAATTGGTGGTGAAAAATTTTCAGGGTGTTGCTACTTCTTTGGAAGGTTGTGTTAATGAGTACCTGCAATGTGTGGAATATGAGAGGATTCCTTCAAAAATTCTTACATACCAAGCTTCCGATGATCCAGTCTACAATGGCTATAGATCAGTTGTACAATCTACAAGCCAAGAGGACTCCCTGTTGGATTTTGCCATATGGGAGCCACCTCATGGGCATTATAGAATGTTCCACTATCCTTGGAAAAGCTATGTTAAAGTAAGTGGTGCATTAAGGCATTGCGCATTCATGGTTATGGCAATGCATGGATGTATACTTTCTGAAATACAGGCACCACCAGAAAAGAGGCAGGTTTTTAGTAGTGAGCTTCAAAGAGTTGGTGTGGAAGGAGCTAAAGTATTACGTGAACTTGGAAGAAAAGTGGAAAAGATGGAAAAACTGGGTCAACAGGATTTGCTCATAGAAGTGCATGAGGCAGCAGAGGAGTTGCAAATGAAGATAGACAAAAATTCATTCCTTCTGGTCAACTTTGCGAGCTGGGAAGCTGGAAGACTGCCAAAGGAATATGAGGATGCCGAGAACATCCTTCAGGTTAAGGACACTGAACTTAAAACACCAGTGATCACTTCTCTCAGTGAAACAGTCCTTGACCTCGGATCAGCTCCTAGAAGCTGGAATGCTCAGACTCCAAACATGAGCATGGACCCTCCAATGCCGGGTTGGGTTTCATCAGAAAGTATGTTCAAGAAACAAGTATCGTGGCCGTCAGGTCTCTCATTTAATGCTGATTTGGTGCTCAACGAACAGGAATCAAAAACATATGAGAGTGCCAGCTCCTTGTCTTTAGCAACATTTACTTCACTTCTGATTGAGTTTGTTGCTAGGCTTCAATATCTTGTGGATTCCTTTGAAGAGCTTAGTGAGTTAGCCAAATTTAAGGATCCAGCGGACCTTCCAGCTCCAAAAGAGGTGGTTGGGTTTTGGACCAGACTGCGTCAGTGTTTCGGGTTAAACAATTGA 3390 0.4327 MVMFNNGFVDKSKERLPLIGSLDGVDGEEGSGRISFSWLLKKLKNFWNSVQDVSWKAWEMGRSDPRKIIFAMKMGLALSLVSLLIFWKEPADVGQYSIWAILTVIVMFEFSIGATFIKGFNRGLGTLCAGILAFGFAELSVLAGPCEEVVIVISIFITGFFTSYLKLYPTMAPYEYGFRVFIMTYCILMMAGNRTREYNQAVVIRLVLIAVGGGVCFIVNICFYPIWAGEDLHSLVVKNFKGVATSLEGCVNGYLKCVQYERVPQKIHTHQASDDPLSNGYRSVVESTSREATLLGFAIWEPPHGRYRMFNYPWKNYVKLSGALRHCAFMVMALHGCILSEIQAPAERRLVFQSELQRVGTEGAKVLRELANKVEKMEKLSPGDILKEVHEAAEQLQKKIDQRSYLLVNSESWLIGRTREVEDPVNLEDVKDNENVKLGSKSLSETVLEIRSFLAWPPSGDVFRKQSPWPSRPSFIADAVIREDEIRTYESASALSLATFVSLLIEFVARLQNVVDSFQELSEKAEFRKPSVYFSHPLYQGVFLRKMAAKVGSFRHSFVERSKERLLSRKGYSEFGLNSSDGGDEPVKCLCFRWRTDAIINFWNGLQDTASRLFEMARSDPRKVYFAAKMGLSLAIVSLFIFLKEPLKDVSQYSIWAILTVVVVFEFSVGATLSKGFNRALGTFSAGGLALGIAELSMLTGALEEVIIIISIFIAGFCASYCKLYPEMKPYEYGFRVFLLTFCIVLVSGSTSSKFLQTALYRLLFIGVGAGICLVVNTCICPIWAGEDLHKLVVKNFQGVATSLEGCVNEYLQCVEYERIPSKILTYQASDDPVYNGYRSVVQSTSQEDSLLDFAIWEPPHGHYRMFHYPWKSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFSSELQRVGVEGAKVLRELGRKVEKMEKLGQQDLLIEVHEAAEELQMKIDKNSFLLVNFASWEAGRLPKEYEDAENILQVKDTELKTPVITSLSETVLDLGSAPRSWNAQTPNMSMDPPMPGWVSSESMFKKQVSWPSGLSFNADLVLNEQESKTYESASSLSLATFTSLLIEFVARLQYLVDSFEELSELAKFKDPADLPAPKEVVGFWTRLRQCFGLNN* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0314 1129 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 35 531 - -
Vvi1g0314 1129 Pfam Aluminium activated malate transporter 58 522 IPR020966 GO:0015743
Vvi1g0314 1129 Pfam Aluminium activated malate transporter 614 1097 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0314 Vvi-Chr1 2981684 2996541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0314 47 529 Miscellaneous Gene Families AT1G25480 58.669 0.0 572