Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0312 ATGGCTGCCATCACCATGGATCCGAGTTTGAGCCGACAAGTTGGCAAAGACAGCCACCAGCACGGCGCTGTAGTTGAGGAAATCCATGGGCTCATCAGAGTGTACAAAGATGGACACGTGGAAAGACCCCAGATCGTTCCATGTGTGACAAGCCTGTTGCCTTCGGACCTGGGCGTGACTTGTGGAGACATAGTGATTCACAAGTTAACAAACATTTGGGCACGTTTTTATGTGCCAGCTGTTAGGTGCCATGGGAAGCTCCCATTGCTCGTCTACTTCCATGGAGGTGGGTTCTGTGTTGGCTCAGCCGCTTGGAGTTGCTACCATGACTTCCTGGCAAGGCTAGCTGCTAAAGCTGGTTGCTTGATCATGTCCGTGAATTATCGATTGGCCCCGGAAAACCCTCTTCCGGCAGCTTATGAAGATGGGTTTAAGGCTTTTCTGTGGTTGAAACAAGAAGCTGTATCCGGGGCCAGTGAATGGTGGTCTAGGGCTTGCAACTTCTCCAGCATCTTCCTTGCCGGTGACAGTGCCGGTGGCAACATTGCCCACCACTTGTCTTTAAGGCTAGGTTCTAACAGGGCAAGCGAAGCCACAGCCTTGAAGCCGTTGGTTTTCAAGGGGACAATTCTAATACAGCCATTCTTCGGCGGAGAGGCACGCACTCATTCTGAGAAGCAGATGGTATCTCCCTCAGTGCTGAGCTTAACGGCCTCTGATACATACTGGAGGTTGTCCTTACCATATGGTGCAAATCGTGACCATCCATGGTGCAACCCAATGTCAAAGGGGTCCATTAAATTGTTGGAGTTGAGGCTCTTACCCACCATGGTGTGCATTTCAGAGATGGACATATTGAGAGACAGAAATTTAGAGTTTTGCAGTGCTTTGGCTAGTGCGGGTAAGAGGGTGGAGCATGTTGTGTACAAAGGTGTAGGGCATGCATTCCAGATTCTGAATAAGTCACCCCTCGCACAAACTCGTACCCTAGAAATGTTGTCACATATCAGTTCCTTCATTACTAGATGGCCCCTGGACCCTCCTACTCATCATGATTGTCGTTGA 1065 0.4986 MAAITMDPSLSRQVGKDSHQHGAVVEEIHGLIRVYKDGHVERPQIVPCVTSLLPSDLGVTCGDIVIHKLTNIWARFYVPAVRCHGKLPLLVYFHGGGFCVGSAAWSCYHDFLARLAAKAGCLIMSVNYRLAPENPLPAAYEDGFKAFLWLKQEAVSGASEWWSRACNFSSIFLAGDSAGGNIAHHLSLRLGSNRASEATALKPLVFKGTILIQPFFGGEARTHSEKQMVSPSVLSLTASDTYWRLSLPYGANRDHPWCNPMSKGSIKLLELRLLPTMVCISEMDILRDRNLEFCSALASAGKRVEHVVYKGVGHAFQILNKSPLAQTRTLEMLSHISSFITRWPLDPPTHHDCR* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0312 354 Pfam alpha/beta hydrolase fold 90 317 IPR013094 GO:0016787
Vvi1g0312 354 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Vvi1g0312 354 SUPERFAMILY alpha/beta-Hydrolases 24 341 IPR029058 -
Vvi1g0312 354 Gene3D alpha/beta hydrolase 29 343 IPR029058 -
Vvi1g0312 354 PANTHER ARYLACETAMIDE DEACETYLASE 26 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0312 Vvi-Chr1 2958067 2959131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0312 16 346 Carbohydrate Esterase AT1G68620 56.973 5.63e-129 371