Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0309 ATGTATCCAAACAACTCCATTAATGCCCCCACTTCCAAATCGGCTGTGCCAGTGCCAGTGCCAGTGCCAGCGCCGGCTCCAGCTCCAAATCAGGTCCCAGAAGGACAGTGGTCTACAGGCCTCTGGGATTGTTCGGAAGATCCCTCTAACTGTTTCATCACCTGCTTCTGCCCATGCATCACACTGGGGCGGGTCGCGGAGATTATCGATAGAGGGACTCCATCGTGCAGGGTGTCTGGCCTAATCTACTACGCGCTTGGCGCGGTTGGTTGTGGATGGCTCTTTGCTGGTACCTACAGGTCCAAATTGCGGGCAATGTTTTCACTGCCAGAGGCTCCATGTGGGGATTTGCTGGTTCATTGCTGCTGCTGTGTATGTGCTCTTTGTCAAGAGTACAGAGAACTCAAGAACCGAGGTGCTGATCCCTCAATAGGTTGGCAAGCCAATGTGGAAAAGTGGGATGGGGCTGGAATCAAGGTGCCCCCAATTGCTGCACCAGGCATGGCTCGTTGA 513 0.5419 MYPNNSINAPTSKSAVPVPVPVPAPAPAPNQVPEGQWSTGLWDCSEDPSNCFITCFCPCITLGRVAEIIDRGTPSCRVSGLIYYALGAVGCGWLFAGTYRSKLRAMFSLPEAPCGDLLVHCCCCVCALCQEYRELKNRGADPSIGWQANVEKWDGAGIKVPPIAAPGMAR* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0309 170 NCBIfam uncharacterized Cys-rich domain 36 137 IPR006461 -
Vvi1g0309 170 PANTHER DUF614 FAMILY PROTEIN-RELATED 31 144 IPR006461 -
Vvi1g0309 170 Pfam PLAC8 family 37 134 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0309 Vvi-Chr1 2948265 2949046 Wgd