Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0304 ATGGCCATATCAGCCTCAGGACCAGGGAAAGGAGGCTTACTGGAAAGGCCAGTCATAGAGAAAGTGACTCCTGGCCGTGAATCTGAGTTTGATCTAAGGAAATCAAGAAAAATAGCTCCACCCTATCGTGTAATACTGCACAATGATAATTACAATAAGCGGGAATATGTCGTCCAAGTACTGATGAAGGTTATCCCTGGAATGACCCTTGATAATGCAGTTAATATCATGCAAGAAGCACACTACAATGGCTTGTCAGTGGTGATTATTTGTGCTCAGGCTGATGCTGAAGACCACTGCATGCAGCTGCGGGGAAATGGACTTCTTAGTTCCATTGAACCTGCAAGTGGTGGATGCTGA 360 0.45 MAISASGPGKGGLLERPVIEKVTPGRESEFDLRKSRKIAPPYRVILHNDNYNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQADAEDHCMQLRGNGLLSSIEPASGGC* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0304 119 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 9 119 IPR022935 GO:0006508
Vvi1g0304 119 Pfam ATP-dependent Clp protease adaptor protein ClpS 39 105 IPR003769 GO:0030163
Vvi1g0304 119 SUPERFAMILY ClpS-like 36 114 IPR014719 -
Vvi1g0304 119 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 36 114 - -
Vvi1g0304 119 Gene3D - 37 114 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0304 Vvi-Chr1 2888378 2897640 Dispersed/Wgd