Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0303 ATGGTTTCATCTTCTCCTCCCCTTCCTCAAAAGCAAGTTGGACCAGACGGGGAATGGACGGACCAAGGTCCACCTCGGCGGGCCAAATGGTGGTACTCAACTTTTCATACTGTCACAGCCATGATTGGTGCTGGAGTTCTCAGCTTGCCTTATGCCATGGCTTATTTAGGATGGGGCCCAGGGGCAATGGTTCTGGTCGTATCTTGGTGCATCACCTTGAACACAATGTGGCGGATGATACAACTCCATGAATGTGTTCCTGGGATGCGCTTTGATCGCTACATTGATCTTGGTCGATACGCTTTCGGGCCAAAACTGGGGCCATGGATTGTGCTGCCTCAGCAGCTAATTGTACAGGTTGGGTGTGATATCGTGTACATGGTCACTGGGGGGAAGTGTCTCAAGAAGTTCATGGAAATCGCCTGCAGCAACTGCACCAGACTCAGGCAATCCTACTGGATTTGCATATTTGGCTCCATCCATTTCGTCCTGTCTCAGCTCCCAAATTTTAATTCTGTTGCTGGGGTTTCATTAGCGGCTGCCATAATGTCACTATGTTATTCAACTATAGCCTGGGTGGGTTGCTTGAGTAAAGGTCAAATCGAGAACGTGAACTATGGATACAAGTACACAAGCCCAAGCGATTACATGTTCCGGGTTTTCAATGCATTGGGTCAAATCACGTTTGCATTTGCTGGCCATGCAGTGGCCTTAGAAATTCAGGCCACAATTCCGTCAACTCCTGAGAAACCTTCAAGGATACCCATGTGGAAAGGTGCAATCGGGGCCTATTTTATCAACGCAATTTGCTATTTTCCGGTAGCTTTTGTTGGATACTGGGCATTTGGGCAAGATGTTGATGACAATGTGCTGATGGCACTCAAGAGACCTGCATGGCTCATTGCTTCTGCCAATTTAATGGTGGTCATCCATGTCATTGGCAGCTACCAAGTTTATGCAATGCCGGTGTTTGCCTTGCTGGAAAAGATGATGGTCAAGAGATTGAACTTCCCACAAGGAATTGCTCTGAGACTCATTGCTAGATCTGCTTATGTTGCTTTTACACTCTTCGTCGGAGTCACCTTCCCTTTCTTTGGAGATCTTCTTGGTTTCTTTGGAGGATTCGGTTTTGCTCCCACTTCATATTTTCTTCCTAGTATTATATGGCTTGTACTGAAGAAGCCAAGGATGTTCAGCATTTCATGGCTAATCAATTGGGCAAGCATATTCATCGGAGTATTCATAATGTTGGCGTCGACAATTGGTGGTTTGCGAAATATTATTATCGATGCCTCCACATATAGTTTCTACTCATGA 1317 0.4601 MVSSSPPLPQKQVGPDGEWTDQGPPRRAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWGPGAMVLVVSWCITLNTMWRMIQLHECVPGMRFDRYIDLGRYAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACSNCTRLRQSYWICIFGSIHFVLSQLPNFNSVAGVSLAAAIMSLCYSTIAWVGCLSKGQIENVNYGYKYTSPSDYMFRVFNALGQITFAFAGHAVALEIQATIPSTPEKPSRIPMWKGAIGAYFINAICYFPVAFVGYWAFGQDVDDNVLMALKRPAWLIASANLMVVIHVIGSYQVYAMPVFALLEKMMVKRLNFPQGIALRLIARSAYVAFTLFVGVTFPFFGDLLGFFGGFGFAPTSYFLPSIIWLVLKKPRMFSISWLINWASIFIGVFIMLASTIGGLRNIIIDASTYSFYS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0303 438 Pfam Transmembrane amino acid transporter protein 27 422 IPR013057 -
Vvi1g0303 438 FunFam Lysine histidine transporter 1 24 433 - -
Vvi1g0303 438 PANTHER OS05G0424000 PROTEIN-RELATED 28 423 - -
Vvi1g0303 438 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0303 Vvi-Chr1 2879380 2882031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0303 18 438 Organic Solute Cotransporters AT1G25530 77.435 0.0 669