Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0301 ATGGCGGAGAAGCAGCTGGTCGTGGCCGTTGAAGGCACTGCCGCCATGGGTCCCTATTGGCAAGCCGTTGTTTCCGATTACCTGGACAAGATCATCAGGTACTTTTGTGGTAATGAGTTGGCAGGGCAGAAGCCCTCTTCTTCTAACTTTGAGCTCTCTCTGGTCATGTTTAATGCTCATGGATCTTATTGTAGTTGCTTAGTACAACGAAGTGGTTGGACAAGAGATGTTGATCTTTTCTTGCAGTGGCTGTCTGCTTTACCCTTTGCTGGTGGTGGTTTCAATGATGCTGCAATTGCAGAAGGGCTTGCTGAAGCTCTGATGATGTTCTCTGTTGCTGCAAATGGAAGCCAAACCCAACAAAATGTGGATGGACAACGACATTGCATTCTAGTAGCTGCAAATAACCCTTATCCCTTGCCCACACCAGTTTATCAACCACAAATGCAAAACATGGAACAGAATGAGAGCATTGAATCACAAACAGAAAGTCGTCTTTCTGATGCAGAGGCAGTTGCTAAATCATTTGCTCAGTGCTCTGTTTCTTTGTCAGTCATTTGTCCAAAACAGCTTCCGAAACTAAAATCAATTTATAATGCGGGAAAGCGCAATCCCCGAGTAGCAGATCCACCAGTTGATAATGTTAAAAACCCTCATTTCCTGGTTCTAATCTCAGATAGTTTCATGGAGGCTCGTGCTGCTTTAAGTCGGCCTGGACTTTCAAATATGACAGCAAATCAGAGTCCTGTAAAAATGGATATAGCTTCAGTTCCTCAGGTTTCAGCGGCCCCTCCTGCTTCTATTCCATCAGTGAATGGTATCATGAACCGGCCAACAATTGCTGTTGGAGCTGTCCCGACTGCTACTGTAAAAGTTGAACCAAGCACGGTAACTTCCATCACATCTGGACCTGGTTTTCCACATATTCCATCTGTCCCACGTGCTGCTTCTCAAGGAGTTCCAAGCCTTCAGACTTCTTCACCATCTTCTACTTCTCAGGAGATGATCTCAAATGGTGACAATGTCCAAGATTTGAAACCTATAGTGAGTGGTATATCACAGACCTTACGTCCTGTGGTTCCCGCTGCAGCAAATGTAAGCATTCTGAACAACCTCTCTCAAGCACGGCAAGTGATGCATTCTGCAGCCCTAAGTGGGGGAACTTCTATAGGACTTCAGTCAATGGGTGGGACTTCCATGGCTATGCATATGTCAAATATGATATCCAGTGGAATGGCATCATCTGTACCTGCCACTCAAACTGTGTTCTCATCTGGGCAGTCAGCTGTCTCATCAATAACTGGATCAGGGACACTAGCAGGAACTGCACAGGTTGCACAAAACTCAGCTCTTGGTTCGTTCACTTCAGCAACTTCTAATATGTCAGTAAACTCAAACCTTGGCATTTCTCAACCATTGAGTAATCTTCAAGGAGGTGTTAGTATGGGCCAAACAGTACCTGGAATGAGCCAAGGGAATCTTCCTGGAGGACAAATGGTACAAAGTGGAATTGGTATGAACCAGAACATGATGAGTGGTCTTGGTCCATCAGGTATATCTTCTGGAACTGGCACAATGATTCCTACTCCAGGAATGTCTCAACAAGTGCAACCAGGAATGCCATCTCTTGGTGTGAACAACAATGCAGCAGCTAATATGCCCTTACCACAGCAGACATCAGGTGCTATGCAAACAGCACAGTCCAAATATGTAAAGGTCTGGGAGGGAAACTTATCGGGGCAGAGACAAGGGCAGCCTGTTTTCATCACCAGACTTGAAGGTTATAGAAGCGCATCGGCTTCAGAGTCGCTTGCAGCAAACTGGCCTGCGACGATGCAAATAGTACGGCTTATATCCCAGGACCACATGAATAACAAGCAGTACGTTGGGAAAGCAGATTTTCTAGTTTTTCGAGCAATGAACCAGCATGGATTTCTTGGGCAGCTGCAGGAAAAGAAGCTTTGTGCAGTCATCCAGTTACCATCTCAGACATTGCTGCTCTCTGTTTCTGACAAAGCCTGCCGTTTGATAGGAATGCTTTTTCCTGGGGATATGGTTGTTTTCAAGCCACAGATAACCAATTCGCAGCAGCAACAACATCAGCAACTGCAACAACAGCAGATTCCGCTGCTGCAACAACAGCAACAGCTTGCACCGCTCCAGCAACAGCAACAGCTTCCACAGCTGCAACAACAACAACAGCTTCCCCAACTTCAGCAGCAGCAACAGCTTCAGCAGCAGCAGCATCCCCAGCTTCAGCAACAGCAACAGCTTCCCCAGCTTCAGCAACAACAGCAGCTTCCACAACTGCAGCAACAACACCAGCTTTCCCAACTGCAGCCACAGCAGCAGCACCAGCCCCTACAACAGCAACAGCAGCCGCAACAAATGGTTGGGACAGGAATGGGTCAAGCTTTTGTTCAAGGTCCAGGGCGGTCATCACAAGGGCCACCAAACATGCCTGGAGGGGCCTTTCTGGGCTAA 2484 0.4706 MAEKQLVVAVEGTAAMGPYWQAVVSDYLDKIIRYFCGNELAGQKPSSSNFELSLVMFNAHGSYCSCLVQRSGWTRDVDLFLQWLSALPFAGGGFNDAAIAEGLAEALMMFSVAANGSQTQQNVDGQRHCILVAANNPYPLPTPVYQPQMQNMEQNESIESQTESRLSDAEAVAKSFAQCSVSLSVICPKQLPKLKSIYNAGKRNPRVADPPVDNVKNPHFLVLISDSFMEARAALSRPGLSNMTANQSPVKMDIASVPQVSAAPPASIPSVNGIMNRPTIAVGAVPTATVKVEPSTVTSITSGPGFPHIPSVPRAASQGVPSLQTSSPSSTSQEMISNGDNVQDLKPIVSGISQTLRPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSVPATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNLQGGVSMGQTVPGMSQGNLPGGQMVQSGIGMNQNMMSGLGPSGISSGTGTMIPTPGMSQQVQPGMPSLGVNNNAAANMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASESLAANWPATMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKACRLIGMLFPGDMVVFKPQITNSQQQQHQQLQQQQIPLLQQQQQLAPLQQQQQLPQLQQQQQLPQLQQQQQLQQQQHPQLQQQQQLPQLQQQQQLPQLQQQHQLSQLQPQQQHQPLQQQQQPQQMVGTGMGQAFVQGPGRSSQGPPNMPGGAFLG* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0301 827 MobiDBLite consensus disorder prediction 772 827 - -
Vvi1g0301 827 MobiDBLite consensus disorder prediction 317 336 - -
Vvi1g0301 827 MobiDBLite consensus disorder prediction 298 336 - -
Vvi1g0301 827 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 1 757 IPR045105 -
Vvi1g0301 827 MobiDBLite consensus disorder prediction 772 815 - -
Vvi1g0301 827 Pfam Mediator complex subunit 25 von Willebrand factor type A 3 226 IPR021419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0301 Vvi-Chr1 2807025 2878201 Dispersed/Wgd