Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0296 ATGGCGTCTACAAGCTTCCTCAAGCCGATCTCCTCTCTGAAGCTACCCCACCCACGATCACCCCCCTTCCAATCCTCAAAACTACTGGGTTTTGATCTCTCGAACTCATTTCCCACTCAAAACCTCAAATCCTCAACAGCCCATCAGCGATTGTCAAGTACCAGACGTCACTCAAGCGCCACCACAACTACAGCATTCTTCTTCAACCACCATAAAACCACTCCAAAACCTCCAACACCCACTAAAGTTCAAGAACTGTACGTGTACGAAATCAACGAGAGAGACCGCGATAGCCCAGCGTTCCTAAAACTGAGTCAGAAGCCAGCCAACTCACTGGGGGACCTGGTGCCCTTCACCAACAAGATCTACACCGGAGACCTGGAGAAGCGGTTAGGCGTCACCGCTGGCATATGCGTATTGATCCAACACGTACGGGAGAGGAAGGGTGACCGCTACGAAGCCATATACAGCTTCTACTTCGGGGACTACGGACACGTGTCGGTGCAGGGACCGTACTTGACCTATGAGGACACGTATCTAGCGGTGACGGGCGGCTCTGGGATATTCGAAGGGGTGTACGGTGAGGTGAAGCTACAGCAGATCGTGTTTCCTTTCAAGCTCTTTTACACGTTTTATTTGAAAGGCATCCCAGATTTGCCACATGATTTGATGGGCAAGCCCGTGACCCCATCTCCCACCGTTGAACCCTCTCCCGCCGCTAAAGCCACCCTCCCTCATGCCTCTGTCAAAAACTTCACCACCTGA 765 0.5216 MASTSFLKPISSLKLPHPRSPPFQSSKLLGFDLSNSFPTQNLKSSTAHQRLSSTRRHSSATTTTAFFFNHHKTTPKPPTPTKVQELYVYEINERDRDSPAFLKLSQKPANSLGDLVPFTNKIYTGDLEKRLGVTAGICVLIQHVRERKGDRYEAIYSFYFGDYGHVSVQGPYLTYEDTYLAVTGGSGIFEGVYGEVKLQQIVFPFKLFYTFYLKGIPDLPHDLMGKPVTPSPTVEPSPAAKATLPHASVKNFTT* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0296 254 MobiDBLite consensus disorder prediction 1 21 - -
Vvi1g0296 254 PANTHER ALLENE OXIDE CYCLASE 4, CHLOROPLASTIC 3 253 IPR009410 GO:0016853
Vvi1g0296 254 SUPERFAMILY Allene oxide cyclase-like 82 253 IPR034871 GO:0009695|GO:0046423
Vvi1g0296 254 Gene3D - 69 254 IPR044859 -
Vvi1g0296 254 Pfam Allene oxide cyclase 80 252 IPR009410 GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0296 Vvi-Chr1 2766597 2767442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0296 19 253 Acyl Lipid Metabolism Gene Families AT1G13280 59.664 5.64e-93 272