Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0295 ATGGGATTCGGTACTTCGCTATCTCATGCGCGACCACTGCAACTCTCTTCATCTCTTTATGGCGAGGCCTTGTCATCTTCCTCCTCATCCAGCCTCTTTATGGGGGGTCCATTCGCCGCCTCCGTGCCCTTTACCCTCACTGGGAACAAATTACATTTTCGAAAGCTCGTTGTTGTCTCCAAAAGGATATCGGGCTTGGAGGAAGCCATGAGAATTCAGAGACAAAAAGAGCTTCGAGAAAAAAGAACCTTTAGAAGAAGGATACCATTAAGGCGTGGAAGGGTATCACCCCGTCTTCCTGTGCCTGACCACATACCAAAGCCTCCTTATCTAAGTTCAACTTCATTGCCCGAACTATCAAGTGAACATCAAATTCATGACTCTGAAGGCATCAGTCGCATGAAAGCTGCATGTGAGCTAGCTGCCCGTGTCTTAGACTATGCAGGAACGTTGGTTAGGCCATCAGTAACAACAAATGAAATTGACAAAGCAGTGCATCAGATGATAATTGAGGCTGGTGCTTATCCTTCACCTCTTGGCTATGGAGGATTTCCAAAGAGTGTGTGCACTTCAGTTAATGAGTGCATGTGCCATGGGATTCCTGATTCTCGCCAGCTACAGGATGGTGACATAATAAACATTGATGTAACAGTCTACTTTAATGGTTATCATGGAGACACATCAAAGACTTTTCTTTGTGGCAATGTTACTGATGGACTCAAACGCCTTGTGAGGGTAACTGAAGAGTGTATGGAAAGAGGCATAGCTTGTTGCAAAGATGGTGCTAGTTTTAAGAAAATTGGAAAGAGAATTAGTGAGCATGCTGAAAAATTTGGTTTCGGTGTGGTGGAGCGCTTTGTGGGGCATGGTGTGGGGACCGTATTTCATTCTGAACCAGTTATATTGCATCATCGCAACGACAAGTCGGGTCACATGGTTGAAGGTCAAACATTTACTATTGAGCCAATTCTTACAATTGGAAGCACAGAATGCATAACATGGTCTGACAACTGGACAACTGTGACAGCAGATGGATTCCCTGCTGCACAGTTTGAGCATACCATTTTGATTACTAGAACTGGTGCAGAAGTTTTAACAAAGTACTGA 1107 0.4435 MGFGTSLSHARPLQLSSSLYGEALSSSSSSSLFMGGPFAASVPFTLTGNKLHFRKLVVVSKRISGLEEAMRIQRQKELREKRTFRRRIPLRRGRVSPRLPVPDHIPKPPYLSSTSLPELSSEHQIHDSEGISRMKAACELAARVLDYAGTLVRPSVTTNEIDKAVHQMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQDGDIINIDVTVYFNGYHGDTSKTFLCGNVTDGLKRLVRVTEECMERGIACCKDGASFKKIGKRISEHAEKFGFGVVERFVGHGVGTVFHSEPVILHHRNDKSGHMVEGQTFTIEPILTIGSTECITWSDNWTTVTADGFPAAQFEHTILITRTGAEVLTKY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0295 368 Hamap Methionine aminopeptidase [map]. 123 368 IPR002467 GO:0006508|GO:0070006
Vvi1g0295 368 FunFam Methionine aminopeptidase 88 368 - -
Vvi1g0295 368 CDD MetAP1 131 367 IPR002467 GO:0006508|GO:0070006
Vvi1g0295 368 PRINTS Methionine aminopeptidase-1 signature 280 292 IPR001714 -
Vvi1g0295 368 PRINTS Methionine aminopeptidase-1 signature 188 201 IPR001714 -
Vvi1g0295 368 PRINTS Methionine aminopeptidase-1 signature 210 226 IPR001714 -
Vvi1g0295 368 PRINTS Methionine aminopeptidase-1 signature 310 322 IPR001714 -
Vvi1g0295 368 Pfam Metallopeptidase family M24 133 358 IPR000994 -
Vvi1g0295 368 PANTHER METHIONINE AMINOPEPTIDASE 49 367 - -
Vvi1g0295 368 NCBIfam methionine aminopeptidase, type I 125 367 IPR002467 GO:0006508|GO:0070006
Vvi1g0295 368 SUPERFAMILY Creatinase/aminopeptidase 84 367 IPR036005 -
Vvi1g0295 368 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 286 304 IPR002467 GO:0006508|GO:0070006
Vvi1g0295 368 Gene3D Creatinase/methionine aminopeptidase superfamily 88 368 IPR036005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0295 Vvi-Chr1 2754341 2765634 Dispersed