Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0292 ATGTTGCCGTTCCCACCGTTGGCGATTGTGCTGATCCTTTCCATTGCAGTACATTTTCCGGCGACTGTGACATCCGGAGATCTCCCTTCGTTTAGTGAGGCACCGGCATTTCGGAACGGCGAGGAATGCCCCAGGACGACGTGGTCTTCGCTGCCAAAGGGTTCGTACAACCCTTCTATCATTCACATAGCCATGACCCTCGATGCCACTTATCTCCGTGGCTCGATCGCTGGGGTATTGTCAGTTCTGCAGCACGCGTCTTGTCCGGAAAACATTGTCTTCCATTTCCTTGCTAGTCATCGGAGAGCGGAGCTGCGGCGGATCATCGTCACTACCTTTCCTTATCTGTCGTTTCATCTGTACCACTTCGATACCAACCTCGTCAAAGGCAAGATCTCATCGTCGATTCGTAGAGCGCTTGACCAGCCGCTCAACTACGCCAGAATCTATCTTGCGGACCTCCTCCCCGGCGGCGTCCGCAGGATAATATACTTCGATTCCGACTTGATCGTCGTCGATGACGTCGCAAAGCTGTGGGAGATCAATCTAGGGCCGCACGTTCTCGGTGCGCCGGAGTACTGCCACGCCAATTTTACCAACTACTTCACTGCAAAATTCTGGTCTAACCCAGCTTTCACGACGTCGTTTCGGGGCCGAAAGCCGTGTTACTTCAACACAGGCGTAATGGTGATCGATCTGTGGAGGTGGCGCGAAGGCAAATTCACGGAAAGACTCGAGACGTGGATGAGAATACAGAAGAGGTATAGAATCTACCAGCTCGGTTCACTGCCACCGTTCTTACTGGTCTTCGCCGGAGACGTGGAAGGGGTGGAGCACCGGTGGAACCAGCACGGGCTTGGTGGGGACAACCTGGAAGGATTATGTAGAAATCTCCACCCAGGTCCGGTGAGTCTCCTTCACTGGAGTGGCAAAGGCAAGCCATGGCTGAGACTGGACTCGAAGCGACCGTGCCCACTCGACAGCTTGTGGGCACCGTACGATTTGTTCCGTCACGCATCGCTGATATCGGACAGCTGA 1038 0.5434 MLPFPPLAIVLILSIAVHFPATVTSGDLPSFSEAPAFRNGEECPRTTWSSLPKGSYNPSIIHIAMTLDATYLRGSIAGVLSVLQHASCPENIVFHFLASHRRAELRRIIVTTFPYLSFHLYHFDTNLVKGKISSSIRRALDQPLNYARIYLADLLPGGVRRIIYFDSDLIVVDDVAKLWEINLGPHVLGAPEYCHANFTNYFTAKFWSNPAFTTSFRGRKPCYFNTGVMVIDLWRWREGKFTERLETWMRIQKRYRIYQLGSLPPFLLVFAGDVEGVEHRWNQHGLGGDNLEGLCRNLHPGPVSLLHWSGKGKPWLRLDSKRPCPLDSLWAPYDLFRHASLISDS* 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0292 345 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 339 - -
Vvi1g0292 345 FunFam Hexosyltransferase 62 324 - -
Vvi1g0292 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 61 326 IPR029044 -
Vvi1g0292 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 341 IPR029044 -
Vvi1g0292 345 Pfam Glycosyl transferase family 8 62 317 IPR002495 GO:0016757
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g0292 Vvi-Chr1 2718159 2719196 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0292 21 345 Glycosyltransferase AT1G13250 79.817 0.0 524