Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0289 ATGGATGAGGAAGAGATGGAGAGAAGGGAGGCAGCCACAGATGAAGGAACAGACACTGCCATAGAAGCAGATGAAAACAAGTTGAAAGAGCGAAAGGTCTCATGGGCAAAGCTCCGCCGTGTAGACTCTCTCAATTTGGAGGCTGGACGAGTTTCTACTGCCGGAGGCCACACCTCCAAGGTAGATTGGAGGAGAACGTTGAATTTAGCATTTCAGAGCATAGGGGTGGTATATGGAGATATAGGGACCTCTCCGCTCTATGTGTTTTCCAGCACTTTCACCGATCATAAGATTGAGAACACAGACGACATTCTTGGGGTGTTGTCACTCGTCATCTATACCATAGTCCTTGTGCCTCTGCTGAAGTATGTTCTTATCGTGCTGCGAGCCAACGACAACGGGGATGGTGGAACATTTGCACTCTATTCCTTGATATGTCGTTACGCAAGGGTGAGCTTAATTCCAAATGATCAACCAGAGGACAGACAACTATCCAACTACAAATTGGATACTCCATCCAACCAGTTGAGACGTGCCCAAAAGATTAAAGAGAAGCTTGAGAATAGTAGAACTTCCAAGGTTGTGCTTTTCATTGTTACCATCTTAGGAACTTCCATGGTGATTGGAGACGGGGTTCTGACTCCATGCATCTCAGTCCTTTCTGCTGTGAGTGGGATAAGTTCACTAGGCAAAGATGCTATAGTGGGGATTTCAGTAGCGATCCTGATCTTGCTCTTCTCTGCTCAACGTTTTGGCACTGATAAAGTGGGCATCGCCTTTGCCCCTGTCATTCTGTTGTGGTTTACCTTCATAAGTGGTATCGGTCTCTACAACCTATTCAAATATAACGTGGGAGTACTGCGTGCATTCAATCCCAAATATGCCGTAGATTACTTCAAAAGAAATGGTAAGAAAGGGTGGATATCACTTGGTGGGGTTGTTCTATGCATTACAGGAACTGAAGCAATGTTTGCTGACCTGGGTCACTTCAACATTCGAGCTATCCAAATTAGTTTCTCTGGCATTGTGTTCCCCGCATTACTGGCTGCATATAGTGGGCAAGCTGCATACCTCACTAAATTCCCTGGTGAGGTGGAACATACTTTCTATAGCTCGATTCCAGATCCTTTGTATTGGCCAACGTTTGTCGTGGCCGTTGCTGCTGCCATTATTGCTAGCCAAGCTATGATATCAGGAGCATTTGCAATTATCTCGCAGTCCCTAAGTCTGTGTTGCTTTCCAAGGGTTAAGGTTGTCCATACTTCTGCTAAGTATGAGGGTCAGGTTTACATACCTGAGGTCAACTATTTGCTTATGGTCGCTTGTGTTATAGTCTGTGTTGGATTCAAGACCACAGAAAAGATAGGCAATGCATACGGAATTGCTGTGGTTGCTGTTATGGTGATTACTACATGTATGGTTACCCTTATAATGCTTGTTATATGGAAGACAAGTATATGGTGGATCGCTCTATTCTTAGTGGTGTTCAGTTCCATAGAAGTGGTATATCTATCATCTGTCCTCTATAAATTCAAACAAGGTGGTTTCCTTCCACTTGCCTTCTCCTTTGTCCTAATGGCAGTAATGGGAATATGGCATTATGTGCACAAAGAAAGATACATGTTCGAGCTTAGGAACAAGGTTTCTAGCGATTACATAAAAGACCTGGCTGCGAACCCTCGTATAAACCGTGTTCCTGGAATAGGGCTATTGTACTCAGAGCTTGTCCAGGGCATTCCCCCAATATTCCCCCACTTCATTGCCAATGTTCCTTCCATCCATTCAGTACTAGTGTTTGTCTCCATTAAGAACATTCCAATTAGTAAAGTGGCATTGGAGGAGCGGTTTTTGTTTCGACATGTAGAGCCAAGAGACTACAGAATGTTCCGCTGCGTGGTAAGATACGGATATAAAGATGTAATCGAGGGATCAAAGGAGTTTGAGCGGCAGTTAGTAGAAAACTTGAAGGAATTCATCCGCCATGAGGGCTACATTTCTGAAGCAAGAGCCGTAGAACAGATGGCTGAACCAGTGAACCTCCAACATTCTACCATATTAGTAAAAGATGGAAAAGCAGGCAGATCAGGGCGTTCATCCACAGTTCACATGGAGGAAGTACTACAGCAGAACCCACCTCGTGTTTCTTCAGGATCTATCCAGTCAATCCATGTGGGTTGTAAGTCAACAAATTCTTCTAGCAGAATGGTCACTGGTCCCATTCAGGGAGCCGAAGAGGAGATGCAAATTGTGCAGACAGCGCAGGAGAAAGGTGTGGTTTACCTCCTCGGAGAAGCAGAAGTGGTTGCAGAAGAGAAATCTTCCTTGTTCAAGCAGATAGTTGTCAACTATGCCTATAGTTTCCTGAGGAAGAACTGCAGGCAAGGAGAGAAAGTGCTGGAAATTCCAAGAACTAGGCTTCTCAGGGTTGGAATGACATATGAGATATGA 2448 0.4457 MDEEEMERREAATDEGTDTAIEADENKLKERKVSWAKLRRVDSLNLEAGRVSTAGGHTSKVDWRRTLNLAFQSIGVVYGDIGTSPLYVFSSTFTDHKIENTDDILGVLSLVIYTIVLVPLLKYVLIVLRANDNGDGGTFALYSLICRYARVSLIPNDQPEDRQLSNYKLDTPSNQLRRAQKIKEKLENSRTSKVVLFIVTILGTSMVIGDGVLTPCISVLSAVSGISSLGKDAIVGISVAILILLFSAQRFGTDKVGIAFAPVILLWFTFISGIGLYNLFKYNVGVLRAFNPKYAVDYFKRNGKKGWISLGGVVLCITGTEAMFADLGHFNIRAIQISFSGIVFPALLAAYSGQAAYLTKFPGEVEHTFYSSIPDPLYWPTFVVAVAAAIIASQAMISGAFAIISQSLSLCCFPRVKVVHTSAKYEGQVYIPEVNYLLMVACVIVCVGFKTTEKIGNAYGIAVVAVMVITTCMVTLIMLVIWKTSIWWIALFLVVFSSIEVVYLSSVLYKFKQGGFLPLAFSFVLMAVMGIWHYVHKERYMFELRNKVSSDYIKDLAANPRINRVPGIGLLYSELVQGIPPIFPHFIANVPSIHSVLVFVSIKNIPISKVALEERFLFRHVEPRDYRMFRCVVRYGYKDVIEGSKEFERQLVENLKEFIRHEGYISEARAVEQMAEPVNLQHSTILVKDGKAGRSGRSSTVHMEEVLQQNPPRVSSGSIQSIHVGCKSTNSSSRMVTGPIQGAEEEMQIVQTAQEKGVVYLLGEAEVVAEEKSSLFKQIVVNYAYSFLRKNCRQGEKVLEIPRTRLLRVGMTYEI* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0289 815 NCBIfam potassium uptake protein 69 815 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0289 815 MobiDBLite consensus disorder prediction 1 23 - -
Vvi1g0289 815 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 61 814 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g0289 815 Pfam K+ potassium transporter 70 639 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0289 Vvi-Chr1 2699662 2703054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0289 15 815 Inorganic Solute Cotransporters AT4G13420 61.710 0.0 1029