Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0275 ATGGCCGAGCAGACCCAAAATCACAAACCCACAAGAAGCTATTGGAGATGGAGTAAACAAGACTTCTTTCCAGAAGAGTCTTTCCAGAACTTGGCTTCATACAAAACTGCTCTTTCCCATACATGTTTCAGGCTCAAGGACCGTCTTCTGAACCGATCCTCCGTTGCAAATGAGATGCTTCTTTTCCAGGAGAGTGAAAACGCCATGAAAAAGTGCCTCACCTGGTGGGACTTGGTCTGGATGAGCTTCGGCTCAGTTGTTGGATCTGGCATATTTGTGATCACTGGGCAGGAAACTCGTTACGATGCCGGACCCGCCATTATATTATCATATGCTGTTTCGGGTTTCTCTGCATTGCTTTCCGTGCTTTGTTACACCGAGTTCGCAGTTGAAATACCCGTTGCAGGGGGGTCTTTCTCTTATCTTAGAGTAGAATTAGGCGACTTTGTTGCATTTATCGCGGCCGGGAACATTCTCTTGGAGGCAATTGTTGGTGCTGCTGGTCTGGCTCGGTCTTGGTCCTCCTACTTTGCCAGTATGATCAATACAGACACCGATTTTTTGAGAATTCGGGTGAGTTATTTTGCAGATGGTTTCAATCTATTGGACCCAATAGCAGCAGTTGTTTTGTTAATTGCAGACGGTATAGCCATGAGCGGGACTAGGAGGACATCTATTTTGAACTGGATCAGTTCTGTGTTGAGTTTTATGGTAATTTTGTTTATTATTGTAATTGGGTTCATTCGTGGCAAGACTTCAAATTTGGTCCCCTTCTTTCCGTATGGTGCAAGAGGGGTTTTCAGGGCTGCGGCAGTTGTGTACTGGTCCTATACCGGTTTCGACATGGTTGCGACCATGGCTGAAGAAACCAAGAATCCCACCAGAGACATACCACTGGGTTTGGTTGGTTCGATGTCAATGATCACTGTTGTTTATTGCTTGATGGCCTTGGTCCTTTCCATGATGCAAAAATACAACGAGGTAGATGCAAATGCTGCTTATTCGGTTGTGTTTGAAAAAATTGGCATGACATGGGCTAAGTATCTTGTTAGCATATGCGCCCTCAAGGGCATGACCACGAGCATGCTAATTGGAGGCCTAGGGCAAGCTCGATACATGACTCAGATCGCAAGAGCTCATATGATTCCCCCCTGGTTTGCCCTCGTTCACCCACGGACCGGAACCCCCATAAATGCAACTCTACTCATGGCCATACCCGGTGCTACGATCGCTCTTTTCTCTAGTTTGGATGTCTTGTCTAGTATTTTTTCATTCAGTACACTCTTAATCTTTATGTTGGTCGCTGTTGCACTGCTCGTGAGGCGATATTATGTGAAGGATACCACTGCGAAGCGTGATTTGGTCAAATTTCTGGCTTGTTTAATTGTTATCATTGGATCATCGATTGGAATAGCAGTGCTTTGGAATTCAAACACGACAGAATGGGTTGGATATGCAGTGGGAGCATTTTTGTGGTTTCTCGGAACTTTGGGGATGGGGTTGCTTCCAAAGCAGCGAGTTACAAATGTCTGGGGTGTTCCACTTGTCCCCTGGTTGCCATCACTGTCAATTGGGATGAACCTGTTTCTCATAGGATCACTGGGTTATCAGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCTAATTTACTACTTTCTTGTTGGTCTCCATGCAACTTATGATATGGCTCGTCAGAATCAACAAGCATAA 1716 0.4528 MAEQTQNHKPTRSYWRWSKQDFFPEESFQNLASYKTALSHTCFRLKDRLLNRSSVANEMLLFQESENAMKKCLTWWDLVWMSFGSVVGSGIFVITGQETRYDAGPAIILSYAVSGFSALLSVLCYTEFAVEIPVAGGSFSYLRVELGDFVAFIAAGNILLEAIVGAAGLARSWSSYFASMINTDTDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMVILFIIVIGFIRGKTSNLVPFFPYGARGVFRAAAVVYWSYTGFDMVATMAEETKNPTRDIPLGLVGSMSMITVVYCLMALVLSMMQKYNEVDANAAYSVVFEKIGMTWAKYLVSICALKGMTTSMLIGGLGQARYMTQIARAHMIPPWFALVHPRTGTPINATLLMAIPGATIALFSSLDVLSSIFSFSTLLIFMLVAVALLVRRYYVKDTTAKRDLVKFLACLIVIIGSSIGIAVLWNSNTTEWVGYAVGAFLWFLGTLGMGLLPKQRVTNVWGVPLVPWLPSLSIGMNLFLIGSLGYQAFLRFFICSAVMLIYYFLVGLHATYDMARQNQQA* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0275 571 FunFam Cationic amino acid transporter 5 67 502 - -
Vvi1g0275 571 Pfam C-terminus of AA_permease 511 560 IPR029485 -
Vvi1g0275 571 Pfam Amino acid permease 73 475 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vvi1g0275 571 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 53 562 - -
Vvi1g0275 571 Gene3D Amino acid/polyamine transporter I 67 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0275 Vvi-Chr1 2546007 2547722 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0275 1 567 Organic Solute Cotransporters AT1G17120 71.127 0.0 820