Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0273 ATGATAGTAAGGTTAGGCTTCTTGGTTGCAGCTTCAATTGCAGCCTATGGAGTTCAGCAGTTCAACATCAAAAACTCAAGGTCGCGTGCCTCTCTAGGCAAGCCTTCAGAAAATGGTGAAGCAAGCTCTGAAGAGGGCCAGAATAAAGAGGAACGTAAAGAGCAGCTCACATGTTCTGATGATTACCTCAAAGAGGTGGATGGGGAGGAGGAAGAGGAGAAAGAAGAGGTTAAATTAATTAGTAGTGAAATAAACTGGGATCTGAGTATTCCACCTGATATCGAAGATGAAGAAATTTTACCTGAATTTGAAGACCTTTTGTCTGGGGAGATTGATATTCCATTACCTAGTGACAAGTTTGACACAGAAACCGCTGCCAAGGTGGAGAAAGACAGAGTTTATGAAACTGAGATGGCAAACAATGCAAATGAACTGGAGCGGCTGCGCAACCTAGTGAAGGAATTGGAAGAGAGGGAAGTGAAGCTTGAAGGTGAATTGCTCGAGTACTATGGTCTGAAGGAGCAGGAGACGGACATTGCTGAGTTACAAAGGCAACTTAAGATCAAGACTGTTGAAATTGACATGCTGAATATCACCATTAGTTCTTTGCAGGCTGAGAGGAAGAAGCTTCAAGATGAGGTTGCACTGGGTGTTTCTGCAAGGAAGGAGCTTGAAGTGGCAAGGAATAAAATCAAGGAATTGCAGAGGCAGATTCAGGTTGAAGCTAACCAGACAAAAGGCCATTTGTTGTTGCTTAAACAACAAGTTTCTGGTCTTCAGACAAAGGAGCAGGAAGCTATCAAGAAAGATGCTGAGATTGAGAAGAAGCTTAAAGCTGCAAAGGAGTTAGAGGTAGAAGTTGTGGAGCTTAAGAGGAGGAACAAAGAACTTCAGCATGAAAAAAGAGAGCTACTAGTTAAGCTGGATGGTGCTGAAGCTAGAGTAGCAGCCCTCTCAAATATGACAGAGAGTGAAATGGTCGCCAAGGCAAGAGAAGATGTGAATAATTTAAGACATGCAAATGAAGACCTTTTAAAGCAAGTGGAAGGGCTCCAGATGAACAGATTCAGTGAGGTTGAAGAGCTAGTGTACCTTCGTTGGGTCAATGCTTGCCTAAGGTATGAACTTCGGAATTACCAGACACCTGGAGGAAAGATATCAGCGCGTGATCTTAGCAAGAGCTTGAGCCCCAGATCGCAAGAGAGGGCTAAACAGCTGATGTTAGAATACGCAGGATCAGAACGTGGGCAAGGGGACACAGATCTTGAAAGCAACTTTTCCCATCCATCCTCTCCTGGAAGTGAGGATTTCGACAATGCTTCCATAGATAGTTCAACTAGTAGATATAGTAGTCTAAGTAAGAAACCTAGCTTAATTCAAAAGCTGAAGAAATGGGGCAAAAGTAGAGATGATTCTAGTGTTCTTTCATCACCAGCTAGATCCTTTGGGGGAGGCTCCCCAGGCAGAACTAGCATAAGCCTACGTCCAAGGGGTCCATTAGAAGCCTTAATGCTAAGAAATGCAGGTGATGGTGTGGCCATCACTACATTTGGTAAGATTGATCAGGAAGCTCCTGAATCTCCTGAAACTCCAAATCTGTCACACATTAGAACAAGGGTTTCTTCTAGTGACTCACTGAATAATGTTGCAGCATCATTCCAATTGATGTCAAAATCAGTGGAAGGAGTTTTAGATGAAAAGTATCCTGCATATAAAGACCGTCATAAACTGGCCTTAGAGAGGGAGAAACAAATTAAGGAAAAAGCTGAGAAAGCAAGAGCAGAGAGGTTTGGTGACAGTTCAGATTTGAAGTATGAGTCTAGGGCCAAAGCAGAGAGAGACAAATCTGTCACTTTGCCTCCAAAACTAGCAAAGATAAAGGAAAAACCCCTTGTTTCTGCTGATTCAAGTGATCAATCCATTGACAGCAAGATGGAGGATTCTCAAGTGGCGAGCAAGATGAAACTTGCTCACATTGAAAAGAGGGCTCCTAGAGTGCCACGCCCACCTCCTAAACCTTCAGGAGGGGCTCCTGCAGGTCCAGGTGCTAATCCTTCGAGTGGAGTACCACCTCCTCCACCTCCTCCTCCAGGTGCCCCGCCACCCCCACCCCCACCTGGTGGACCGCCTCGTCCACCGCCCCCACCAGGAAGCCTCCCAAGAGGGGCAGGAAGTGGAGATAAAGTTCATCGGGCTCCTGAACTAGTTGAATTCTATCAGACACTGATGAAACGTGAGGCGAAGAAGGACACACCATCTTTGGTCTCTTCAACATCTAATGCAGCAGATGCCAGGAGCAACATGATTGGTGAAATTGCAAACAAATCATCATTCCTTTTAGCTGTGAAAGCTGATGTGGAAACTCAAGGTGATTTTGTCCAGTCATTGGCAACTGAAGTTCGAGCTGCTTCCTTTACCAAAATAGAAGATCTGGTGGCCTTTGTGAACTGGTTAGATGAAGAGCTCTCCTTCTTGGTTGATGAACGGGCCGTTCTCAAGCACTTTGATTGGCCTGAAGGGAAAGCAGATGCATTAAGAGAAGCAGCCTTTGAATATCAAGACTTGATGAAATTGGAGAAGCGAGTCTCTACTTTTGAAGATGATCCCAAACTGTCATGTGAAGCTGCTCTAAAGAAAATGTACTCATTGCTCGAAAAAGTGGAACAGAGTGTTTATGCACTCCTACGTACGCGGGACATGGCCATTTCAAGATATAGGGAGTTTGGAATTCCTGTTGACTGGCTTCTAGATTCTGGAGTTGTTGGCAAGATTAAACTTTCGTCTGTACAACTGGCAAGAAAGTATATGAAGCGTGTATCATCAGAGCTTGATGCACTGAGTGGACCAGAGAAGGAACCAAACCGAGAGTTTTTGATTCTGCAAGGCGTGCGTTTTGCTTTCCGTGTTCATCAGTTCGCGGGAGGCTTTGATGCGGAGAGCATGAAGGTTTTTGAAGAACTGAGGAGCCGTGTGAAAACACAAACAGGCGAAGACAACAAGCTAGAAACATGA 3012 0.4475 MIVRLGFLVAASIAAYGVQQFNIKNSRSRASLGKPSENGEASSEEGQNKEERKEQLTCSDDYLKEVDGEEEEEKEEVKLISSEINWDLSIPPDIEDEEILPEFEDLLSGEIDIPLPSDKFDTETAAKVEKDRVYETEMANNANELERLRNLVKELEEREVKLEGELLEYYGLKEQETDIAELQRQLKIKTVEIDMLNITISSLQAERKKLQDEVALGVSARKELEVARNKIKELQRQIQVEANQTKGHLLLLKQQVSGLQTKEQEAIKKDAEIEKKLKAAKELEVEVVELKRRNKELQHEKRELLVKLDGAEARVAALSNMTESEMVAKAREDVNNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPGGKISARDLSKSLSPRSQERAKQLMLEYAGSERGQGDTDLESNFSHPSSPGSEDFDNASIDSSTSRYSSLSKKPSLIQKLKKWGKSRDDSSVLSSPARSFGGGSPGRTSISLRPRGPLEALMLRNAGDGVAITTFGKIDQEAPESPETPNLSHIRTRVSSSDSLNNVAASFQLMSKSVEGVLDEKYPAYKDRHKLALEREKQIKEKAEKARAERFGDSSDLKYESRAKAERDKSVTLPPKLAKIKEKPLVSADSSDQSIDSKMEDSQVASKMKLAHIEKRAPRVPRPPPKPSGGAPAGPGANPSSGVPPPPPPPPGAPPPPPPPGGPPRPPPPPGSLPRGAGSGDKVHRAPELVEFYQTLMKREAKKDTPSLVSSTSNAADARSNMIGEIANKSSFLLAVKADVETQGDFVQSLATEVRAASFTKIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKRVSTFEDDPKLSCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPVDWLLDSGVVGKIKLSSVQLARKYMKRVSSELDALSGPEKEPNREFLILQGVRFAFRVHQFAGGFDAESMKVFEELRSRVKTQTGEDNKLET* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 27 42 - -
Vvi1g0273 1003 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 437 993 IPR040265 -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 587 632 - -
Vvi1g0273 1003 Coils Coil 172 213 - -
Vvi1g0273 1003 Coils Coil 217 244 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 648 667 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 418 450 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 668 720 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 587 729 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 43 60 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 469 496 - -
Vvi1g0273 1003 Coils Coil 273 321 - -
Vvi1g0273 1003 Coils Coil 327 354 - -
Vvi1g0273 1003 Coils Coil 138 165 - -
Vvi1g0273 1003 SUPERFAMILY Formin homology 2 domain (FH2 domain) 824 884 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 471 488 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 27 60 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 414 450 - -
Vvi1g0273 1003 Coils Coil 572 595 - -
Vvi1g0273 1003 MobiDBLite consensus disorder prediction 633 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0273 Vvi-Chr1 2536481 2541184 Dispersed/Wgd