Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0272 ATGTGTTCTTCCTCTGCATCTCCCTCGTCTCTTTTCCTCTCCACCGGCACTCCTATTCTACGAAGTCGTATCGTTCCAATCTTCAGTTCTTCTAGCCCATTTATCAATTCTCACAGATTCAGAAACCCTAGGTTATGTATCTCCTCATCAGTCTCCGAGACAAGCTTCGAGGTCACGTGGGTGTCTCCTGAACGCAATGCAAGCGACGACTATGGTGGCTGGGCGGTTGTCGAGTCTCCATGTCGTAAGAAGAAGAAAGGGTCAAGTGCACTTTTTTGTGTGGTTACTGGGACTTCGATTGCCATTCTACTCTCCGCCATTGCTTACTTCTCATTATCAAGAAAAGGTTTTAGGCTTCAGTTTAATAAACCGATGCATTCTATCCATGAAATCTTTGTGCGAACTAAAACTGAAGCTGGTCAAAGCAACACTGTGTACTCCAATGCATCTGATGTGGACACCAACATTGTTGAGGCCGGCACAGAGAGTGCATCTAATGAAATTGATGAAGATGTGGCATCAGCATCCAAAAAGGTTAAGCATGTTCTGATCCCAGTTGCTGCAGATTCCACTCAACAAGAAGCTCTATTGGTTCTGAAGAAACTGAAGATAATTGAGGATGATGTCAGTGCAGATGAATTATGCACTAAGAGGGAGTATGCAAGATGGTTGGTCCGAGCAAATTTGTTACTAGAAAGGGACCCAAGACACAGGATATTTTCCTCCAGTTTACCTTCTGGGTCCATAATTTCTGCATTTGATGATGTGAATGCTGAAGACAGAGATTATGGGTCTATTCAAGCCCTAGCAGAGGCTGGCATTATACCTAGCAAGCTATCAGGGAACTCCAACTCTGCTCTTGACAGTTCGAAAGTCCAGGGAGAGGTCTATTTTTCCCCTGATAGATTTATATCCAGACAAGATCTGATAAACTGGAAGGCTCAATTAGAATATAAATTCATGCCAGGAATTAAAGAGAAGATATCCAGAACAAAAGTGGATTTTATGGACATGAAGGAGATCAGTTCAGATGCATCACCAGAGTTTTTTATAGACATGCTGGCTGGTGACAGGAGTATAGTCAGAAAAGTTTTTGGACAGAGCAAGCGGTTTCAACCAAATAAACCTTCAACAAAAGCACAATCAGCAGTTGCACTGACAAGTGGTAGGATGACAGAAGTAATTCATACAGAATTGTTGAGACTAGAGGCTGAGAAACTCTCAAGGGAAGCTGAAGCTGAAGAAATTAGGTCTCAGTTGCTCAACCGAGGAGACATACAAAGCTTTTGGAGTGAGAAGATTAAAGATGAGAAAATCCGTGGTTTTGAGGTGGAGAAGGACTATCTTGCTGCAGTTAGTGATTTGGAAGAGGAGAGGATTGTTCATGTGAATTGTCTCACTGAGAATTTGAAGGAGAAGGCAGCTATGGAATGCCAGAGTCAGCTTCTTTTCAGGCTCAAAGATGAAGTCGATGAGATGTCAGAGCGGCTTGCATGTGAGAGGACGGGTTATATGGCTGAGCAGCGCAATTTGCAGGACATGCTCAATGAATTACAGAACAAACAGGAAGGAGTGCTTGATGTGAAATCTATACTGGAAGCTGAGAAAGAAGCTCTTCGAATTCTCAGATCTTGGGTTGAGGATGAAGCACGAAAAAACCAAGCTCGTGCCAAGGTTCTTGAGGAGGTAGGACGGCGGTGGAAATGGGACAGTGATGCCCAAATGTCATAA 1731 0.4344 MCSSSASPSSLFLSTGTPILRSRIVPIFSSSSPFINSHRFRNPRLCISSSVSETSFEVTWVSPERNASDDYGGWAVVESPCRKKKKGSSALFCVVTGTSIAILLSAIAYFSLSRKGFRLQFNKPMHSIHEIFVRTKTEAGQSNTVYSNASDVDTNIVEAGTESASNEIDEDVASASKKVKHVLIPVAADSTQQEALLVLKKLKIIEDDVSADELCTKREYARWLVRANLLLERDPRHRIFSSSLPSGSIISAFDDVNAEDRDYGSIQALAEAGIIPSKLSGNSNSALDSSKVQGEVYFSPDRFISRQDLINWKAQLEYKFMPGIKEKISRTKVDFMDMKEISSDASPEFFIDMLAGDRSIVRKVFGQSKRFQPNKPSTKAQSAVALTSGRMTEVIHTELLRLEAEKLSREAEAEEIRSQLLNRGDIQSFWSEKIKDEKIRGFEVEKDYLAAVSDLEEERIVHVNCLTENLKEKAAMECQSQLLFRLKDEVDEMSERLACERTGYMAEQRNLQDMLNELQNKQEGVLDVKSILEAEKEALRILRSWVEDEARKNQARAKVLEEVGRRWKWDSDAQMS* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0272 576 Coils Coil 397 419 - -
Vvi1g0272 576 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 157 570 - -
Vvi1g0272 576 Coils Coil 501 524 - -
Vvi1g0272 576 ProSiteProfiles S-layer homology (SLH) domain profile. 249 327 IPR001119 -
Vvi1g0272 576 Pfam S-layer homology domain 253 309 IPR001119 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0272 Vvi-Chr1 2528541 2534040 Dispersed