Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0270 ATGGAGTTCTCTTGCGAGGAATTCAAGGTAGGCAAATGTGAGGGCCAGAAACTAGTGCATGGTGAAACCATGCCATTGGTGCTACACTCTCCGGACCCCAACAACAGCAGTGACTTAGACTCCCTTGTGTCGAGTCTGAAGAAGAACAAGGACTGGTTTGAGCAGATGATCATCAAGAACAGTGCTGTCCTTCTTCGAGGCTACGACGTGAAGAACGCGGAGGACTTCAACCAGATTGTTGAAGCCTTTGGCTGGGATGACATCCGGTATGTTGGCCCTGCACCTAGGACTCATGTGTATAAACGTATTTGGACTGCCAACGAGGGACCTCTCGAGGAATTCATATACTACCATCATGAGATGGTTTTGATAAAAGAGTACCCAAAAAAAGTAATACTTTTCTGTGAGGTTCCGCCACCAAAAGGTGGTGAAACACCCTTTGTGCCAAGCTTCCGAGTAACAGAGCGGATGCTGGAGGAGTTTCCGGGGGCTGTGGAGGATATTGACAGCAAGGGGTTAAAGTATACGTTCACTGCTCTCAGCAAGAATGATACATCTTCCATGAGAGGTAGAGGCTGGGAGGATACATTTGGAACATCGGACCGGGCAGAAGCTGAGAAAAGGGCCAAGGCTCTGGGGATGGACATGGAATGGCTACCGAATGGTGGGGTGAAGACGGTCTTAGGTCCTCGAGCCCTAACCAAGGTGTTTGATGGAAGAAAGGGGAGGAGGATGTGGTTCAACACCATGGTAGGGATGCATGGGAAGGAGCACAGCTCTGCCATGATGGCAGACGGGACAGAAATACCGGCAAATGTAGTGAAGAGATGTGAAGAGATAATTGAAGAAGAGAGCATACAATTCAAGTGGGAGAAGGGTGATGTTCTCGTCCTAGATAATTTAGCTTTGCTTCATGGAAGAAGGCCTTCCCTTCCTCCAAGGAGGGTCCTGGTAACAACATGCAAGTAG 969 0.4892 MEFSCEEFKVGKCEGQKLVHGETMPLVLHSPDPNNSSDLDSLVSSLKKNKDWFEQMIIKNSAVLLRGYDVKNAEDFNQIVEAFGWDDIRYVGPAPRTHVYKRIWTANEGPLEEFIYYHHEMVLIKEYPKKVILFCEVPPPKGGETPFVPSFRVTERMLEEFPGAVEDIDSKGLKYTFTALSKNDTSSMRGRGWEDTFGTSDRAEAEKRAKALGMDMEWLPNGGVKTVLGPRALTKVFDGRKGRRMWFNTMVGMHGKEHSSAMMADGTEIPANVVKRCEEIIEEESIQFKWEKGDVLVLDNLALLHGRRPSLPPRRVLVTTCK* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0270 322 FunFam Clavaminate synthase-like protein At3g21360 5 322 - -
Vvi1g0270 322 Pfam Taurine catabolism dioxygenase TauD, TfdA family 37 318 IPR003819 GO:0016491
Vvi1g0270 322 PANTHER GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED 13 321 - -
Vvi1g0270 322 Gene3D - 5 322 IPR042098 -
Vvi1g0270 322 SUPERFAMILY Clavaminate synthase-like 8 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0270 Vvi-Chr1 2517662 2519101 Dispersed