Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0264 ATGGGCAACGAGGATTTTATTGAACTCCATGCATTGAATGATGAAGTTAAGGACGGCGTCTTCAATAAGGAGAATGTGAAACAGGCTAAGGGTGAAATCAGAAATTTAGATAAGCAGCACACCCAAAGAAAATACCCTGAGGAAGATTTAGTTGATAAACCGCCGCCTTTGCAGGGGAATGTTGAATTGGTAGAAACTGTTACCATTGCTGAGAAGATGACTGGGATTGAATCCATTGTGCATGGTGGCAATAATGATGTGATTCTCCAAAAGGAAGTTTTTAGCAGCCATAAGATAGATGGTAGCTCTGTAACAGGTGTTAAGAGATCCCGGATGACATGTGATGATCAGCAACCATTTGTGCATGTGATATATAATTCCTTATCAAGAAAAAGCAAAAGGAAGCTTGAGGAGCTTTTACATCATTGGTCAGAATGGCATGCTCAGCAATGTTCTTCATCCAAAGATTCTGATGAAGTTTTGGAGTCGGGTGATGAAACTTATTTTCCAGCATTACATGTTGGTCTTGGTCCTGAGAAAACCTCTATAGTGTCTTTCTGGATGGATAATCAAGTGAAAGAAAAGAAAAACGAGGGGTTCATCTCATTGAATGACAATGCTATTCCTCTATATGATCGAGAATATGCATTGGGTCTAACTTCAATGGATGATTTGAATAACCTGGAAAGAGGCTTGGAAACACTTGATGCTTCTCGCTGTTTCAACTGTGGTTCCTATAACCATTCACTGAAGGAATGCCCTAAGCCTCGAGATACTGTTGCTGTCAATAATGCTCGGAAGCAGCACCAATCCAAGAGAAACCAACCTGTTGGTCCTCGTATTGCAACTCGCTATTACCAAAATTCTCCTGGGGGGAAATATGATGGACTAAAACCAGGTGTTCTTGGTCCTGAAACAAGGAAAATATTGAATCTTGGGGAGTTTGATCCACCTCCATGGCTTAATAGGATGCGTGAGATAGGATACCCACCAGGATATCTAGATGCTGTAGATGAAGACCAGTCTTCAGGGATTATAATATATGCAGATGAGGAAACCAGGGAAGAAGAGGATAAGGAAAATTTAAAATTAAACACTTCAATACTGCAGAAGACAATGTCTGTTGATTTCCCTGGAATAAATGCACCAATCCCAGAGCATGCAGATGAGAGACGCTGGACAACTTCTCAGCTTCCAGTAAGTTTTGATTCTCTGAGGAACCGGGCGAACCTTAGATCAAACTGTTCCTCAGAATCTATCTCCAACGGCCTCCCCCATAATCAGAGGGGGCCCAGGGACTACAGAGATGGTGGCTTCCCTGGTTACAGCCCCACCATGTTTGATCACTCACGTGGCTACAGTGGTTTCAGTCTCAGTCGGCCAAGTGAATACTTCAGTCTAAGAGGTGATAACCCGAATGGCTACAGTGGTTGCAGTCCCAATTATGCAAGTGATCCTTTCAGTCCAAGAGGTGATAACTTGGGCTTCTACAATCCTTTCAGCCCTAATATCACAGGGGACGCCTTCAGTCCAAGAGGTGACCTGTTGATGAGAGGCCCAAGTTTGGGAAGGTCTATGTCCGATAGAGGGAGGAGCTCGTTGTTTCTTGAAGGTTCTAGCCATACTACAGACACTCTCTTACCATATGCATCCTCAGGCCTGCTCCAGTCTCCTCATGATTATGGTTCATTCAGATTTGAGGCTCCAGCTTATGAGGGGCACTGGCGTCCCTACTGA 1737 0.437 MGNEDFIELHALNDEVKDGVFNKENVKQAKGEIRNLDKQHTQRKYPEEDLVDKPPPLQGNVELVETVTIAEKMTGIESIVHGGNNDVILQKEVFSSHKIDGSSVTGVKRSRMTCDDQQPFVHVIYNSLSRKSKRKLEELLHHWSEWHAQQCSSSKDSDEVLESGDETYFPALHVGLGPEKTSIVSFWMDNQVKEKKNEGFISLNDNAIPLYDREYALGLTSMDDLNNLERGLETLDASRCFNCGSYNHSLKECPKPRDTVAVNNARKQHQSKRNQPVGPRIATRYYQNSPGGKYDGLKPGVLGPETRKILNLGEFDPPPWLNRMREIGYPPGYLDAVDEDQSSGIIIYADEETREEEDKENLKLNTSILQKTMSVDFPGINAPIPEHADERRWTTSQLPVSFDSLRNRANLRSNCSSESISNGLPHNQRGPRDYRDGGFPGYSPTMFDHSRGYSGFSLSRPSEYFSLRGDNPNGYSGCSPNYASDPFSPRGDNLGFYNPFSPNITGDAFSPRGDLLMRGPSLGRSMSDRGRSSLFLEGSSHTTDTLLPYASSGLLQSPHDYGSFRFEAPAYEGHWRPY* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0264 578 ProSiteProfiles Zinc finger CCHC-type profile. 239 255 IPR001878 GO:0003676|GO:0008270
Vvi1g0264 578 PANTHER ZINC FINGER, CCHC DOMAIN CONTAINING 8 39 574 - -
Vvi1g0264 578 SMART testneu 294 347 IPR006568 -
Vvi1g0264 578 SUPERFAMILY Retrovirus zinc finger-like domains 235 271 IPR036875 GO:0003676|GO:0008270
Vvi1g0264 578 MobiDBLite consensus disorder prediction 37 51 - -
Vvi1g0264 578 MobiDBLite consensus disorder prediction 37 57 - -
Vvi1g0264 578 MobiDBLite consensus disorder prediction 413 441 - -
Vvi1g0264 578 Pfam PSP 298 334 IPR006568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0264 Vvi-Chr1 2468191 2475113 Dispersed/Wgd