Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0244 ATGAATCCTCCGATGCTTCCCATCACCAATCCTTCTGCTTCTTCAGCAATGGTGGCGACCACATCTTTGACTGCAAATGCGGCCACAATGTTGATTCAGGAGCATCATGATGAGACTGCTCGCCTTCTCATTGATGGTAGGGCCGTCGATACGAAGCCTTTTCTCCCTAGGGCTTCCAGCTACACCAGTACTGGTACGCCCGTTAATGGCAGCAGCTTCTATCAGCAGCGGCGGAGGCGGATTGCCAGCGACACCTCTCTGGCATCTCTCACCACGGGCGGTGGCAGCCGGAGCGAGTACGTGGCCCACGCTGCGTCCGAGACATATTTGCTGACTCGCCTTGGTTTCAAGCTGTTGCGGTATCTTGGGGTAGGCTACAGATGGATTACAAGATTTCTTGCACTTGGTTGTTATGCCTTACTACTTATGCCAGGTTTTATTCAAGTTGGATATTACTATTTCTTCTCCAGTAGGGTCCGCAGAGGTATTGTTTATGGAGATCAACCAAGAAATAGGCTTGATCTGTATTTACCCAAAAACAGTGATGGGCCAAAGCCAGTTGTTGCATTTGTAACTGGTGGAGCCTGGATTATTGGTTATAAAGCATGGGGTTCTCTTTTAGGGCAACAGTTATCAGAAAGAGACATCATAGTGGCATGCATAGATTACAGAAATTTCCCCCAGGGAACCATAAGTGATATGGTGAATGATGCTTCTCTAGGTGTCTCATTTGTGTGCAACAATATTGCTGAATATGGGGGTGATCCTAATAGGATTTATTTAATGGGACAGTCAGCTGGTGCACATATTGCTGCTTGCACTCTCTTGGAGCAGGCAATCAAGGAATGTGGTGAAGGAGGGAGCACTTCTTGGAGTGTCGCCCAGATAAAGGCTTATTTTGGTTTATCTGGAGGGTACAATTTATTTAACCTGATAGATCATTTCCATAGTCGAGGCTTATACCGTTCTATCTTTTTAAGCATAATGGAAGGGGAACAATCTTTACATCAATATTCTCCTGAAGTAACGGTGCAGGATCCGAACATTAAAACTGCAGTTTCTCGCCTACCTCCTATCATCCTTTTTCATGGTACTGCAGATTATTCCATTCCAGCAGATGCCAGCAAGTCTTTTGCAGAGACTCTTCAGAGAGTTGGAGTTAAAGCTGAATCAATAATGTACGAAGGAAGAACTCACACAGATGTATTTCTTCACGATCCAATGAGGGGTGGTAGAGATGATATGTTTGAAGATTTAGTTGCCATGATTCATGCAAATGATCCAGAAGCCCTAGCAAAAGATGCAGTGGCACCTCCAAGAAAACGCCTTGTACCTGAATTCATGTTGAAGTTGGCTCGTGCTGTCAGCCCATTCTAA 1377 0.4532 MNPPMLPITNPSASSAMVATTSLTANAATMLIQEHHDETARLLIDGRAVDTKPFLPRASSYTSTGTPVNGSSFYQQRRRRIASDTSLASLTTGGGSRSEYVAHAASETYLLTRLGFKLLRYLGVGYRWITRFLALGCYALLLMPGFIQVGYYYFFSSRVRRGIVYGDQPRNRLDLYLPKNSDGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTISDMVNDASLGVSFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTLLEQAIKECGEGGSTSWSVAQIKAYFGLSGGYNLFNLIDHFHSRGLYRSIFLSIMEGEQSLHQYSPEVTVQDPNIKTAVSRLPPIILFHGTADYSIPADASKSFAETLQRVGVKAESIMYEGRTHTDVFLHDPMRGGRDDMFEDLVAMIHANDPEALAKDAVAPPRKRLVPEFMLKLARAVSPF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0244 458 SUPERFAMILY alpha/beta-Hydrolases 150 426 IPR029058 -
Vvi1g0244 458 Gene3D alpha/beta hydrolase 155 408 IPR029058 -
Vvi1g0244 458 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 31 423 - -
Vvi1g0244 458 Pfam BD-FAE 173 382 - -
Vvi1g0244 458 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 155 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0244 Vvi-Chr1 2301129 2308215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0244 12 458 Carbohydrate Esterase AT1G26120 67.308 0.0 617