Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0240 ATGCACAGCACATACTTAGGCTCAACTATAACTCTTAGGAGTAAAGGGTCTCTCTTTTTTTCCTTCGATGATCATTCTTACTTGTTCAATGAAAGATTTGATAGAACCCCATTAACATCATCATCATCATGTTGTGCTTGCTGTGGTGCTAATTTTATCCACGGGGTGCCCATAAACCCTGGTTTCTTGTATGGGTTAAGGCAGTCCACTTTAATTCAATGGGCTCCTTCTAGGAGGTTGATATTGGGTGCTGGGGACAGGTATTATTGCCGGCTTCCAGATCGAGGTTGTTATGAGGTGTGTTGCACTCTCAAGGAAAGGAGTGGCAATGGGGGAGGTGGGAGGAGGAGAAGGGGGAAAATTGAGTGTATGGTTTCGGAGGGGAAGAGTGGAAGATGTCATTTGGGTGGTGAGGCTGATGCCGAGGCAGTGCTCAACTTGTTGAGTGAGGAAGTGAGTGAGAGATGTTATGGTGCTAGAGAGACACATGGGAGTTCGTATGAAAGAGTGCGAGCGGAGAAGAGAGGCGATTTGGGTAATGAATGTTACAGGAGAAAGAAGAAAAATGTTGGGTTGGGTTCTTTGGAGTGCAGTTCAAAGCGTGAATCTCAGTCAATTATAGTTGGGTCAAGGGAAGAGGGTCATAGAAGGAGAGAGGAAAAGGAAGCTTCTGTGAGAATTGAAAATCGGGGGCTACGGAAAGAAGGTTCTAGTTGTTCATCTTATTACTCACTTTCATCTTTGGGTGACTCTGAGAGCAACACGGGCGATATTGAAGGCAACCAAGAAGCTCCGGTTAAGCATAGGGGAATTGTGAGAGAATCATCAAGTGGGTATAAGAAGGATTCATGGAAGACTGAAGAGGGTAATGTTGACAGTGAAGTGGTGGAGAAGTTTGAGAAGCAAAGAGATGAGGCAGAAGGATATGGGGAAGTTGCCAAATGGGGAAATACTTCAGTGGGGTCTTATGTGGTGGGGAGTGGTGTTGAGTGGGAGAGGAGAAAGAAGTCCGAGAAGAAGCTTGCTGAAGTATCAATCGAGCGAACTGAATCTATGGAGGAAACCTCAGAAATGGATTCAAAAGTATCACAGATCCATGAAAGCGGTTTTGGAAAGTCTTCTGGCTACCGCAAGCAATTCCATGGCAGGGGAGAGAAGTTGACTGTGGCAGGGAATTTAGACGAGGAAACAAGAAAGCAATATGGTCAGAAAGGTAAACTTGTCATTGGACAGTCAGAGTCTGGAAGAAAATACCAAAGGCTAACTGAATCGTCAGAAGTCCAGGGTAGTGATGTTGAAAGAACTTCTGGATCTCAGAAGCAATTCAGTGGCAGTGAAGAAAATGTAACCACTGCTAAGAATTTGGTCCAGGGAAGAGGAGAAGAACATGGTAAAAAAGATGCCCATATCACTGTCCAAGACAAATTAAAAAGAAACTCTCAGCAGTTCAGTGAAACATCGAGGACTCAAGAGGTAGATGTCAGAAATACCTCCACTTCTCTGAGGCAGTCAGGAACCACAATGAAGAACTGGAATGAAAATTCAACTTCATTCCTGGGCTCGGTTCAGGAGACAAAAGGGCAACAGCACCAAACAGGCGAATGGATCACTGGAGGAATTAACTCTAGAAGAAATTTTCAACAATTCACCGAGATCTCAGATATTCATGATAGTGATATCCGTAACAATAGCATTTCACAGACACAATATGAAACTAGAATGAACAAGCAGGAAGGAAATTGGAACTTGGTTTCCAGTTCACATCCAGAAGCAAAAGAGCAGCACTTGCAAACAGATAAAACAACTATTAGGAGAAATGAGTCCAGAAAAGGATACCAAGATGCCACAAGCATGTCAGTGGTTCATGCTAGTACTACTGAAACAGGTGCCAACCCTCAAAGGACTTCTGAAAAGAGAGTGAGCAATCAAGAAGTTAATTTGACGTCAGTTGTGAAATCAGTTGAGGAAACGAGAGAAAGATATTATCAAGCTGATGAAAGATTGGTGCAAACTAGATCAAGAGAAGAGGTTGAAAAGCCTTCTAAACAATTGCATTTTATTGAGTCTGCACCAGGGGATTCCTCCAGTTCCCAAGCATCTCTGAATTTGGTAGCCCAGGCTAGAGTGCAACAAATTGCTGCAGAGGAAAGAGATAAGACAAGTTCACAGGCAACATTGAAGCCTCCACCATTTCAGTCGGTAGAAAGAGGTCCACTGCATGTGGAACTGACTTCTGGCTTTGCAGCTCAAGAGGTTTCTGGTGAAACTCCAGAAAGTGGCTTTAGTGCCTCATCTACACTCCCTCCAACGAGAAGTCCAACTTGGCAGCGGGAACCACATGGTGAAGCTAGAAGAGGTGAAACTTATGGGGAGCCTCTGAATGTTGCCCCTGGAGATGTATTGGCTTCAGCTGATCGTTTAGAGAAATCCTCCATGCACTTTGTGGGAGAGTTTGTTGAGAAGGTAAGGCATGATGTGTTCACATCTGAAATCCAAAAAGAGAGAGTTTCTGAAGCAAATTTGCTGTACAAAGGTGAGGTCCCTGAGAAACATAAGCAAAAGGGTTCGAGTCATTATGGTTCTGAAAACTTGCAGTTGAAGGAGCATGACTCAAGGCGTTCATCTGGGGCTTCTGGAACAAAGGGGCCTTCTGACGAAATGTGGGATGTAGCAAATCCTTCTCTTCAGGAACCTCCCAAGACAGAAGCAGAAGAGGGCACTACAACAACTGGGACTGCCATCGTAAGGAGAACTGGAAGGTCCTTTTGGAGTGTCATTGCAGACATAGTCCGAATGCGGTGGGTCTCACATTCTGAAACCCATAATTCAGCCATGAAGTCGGGTGGAAGGAGTTCATCAAATGAGTCTGCTGGCAGTGATGCATGGTTTTCTGGTCGTGAGCCAGATGAGCACAATGACGAGAATGCAAAAAGGGAAAAAAGAAGCGTGCAACAAGAATCCATATCTAATGATCAGCCTCAACTGGGAAAAACTCCCACTCTAAATCAAGGAGAAGGGTCTCAAGCAACAAGCACAAAGGACCAAAAAAAGCATGCTGAACTGGACATGCCATCTTCTAGTATTTTAGAAAGTGGCTTAGTGCTCAAAAGCAATTCCTCTGCATCTGGGAAGGAAAGTCTTGGTTGGTATGAAAATGCAGAGAGTTTTCAAGGTTCCCCTTCAAGCTCTGCAGTAGTGGAATCAGCGTTACCAACACCCGGTAGGGACATAAGAAGATCTCCCACTGTGGAAGAAATCTCAAGTAGTACTAAACCTGTTGGATCTGGAAGTGGCTCAATGGAGGGGATGGATCAAAAAGCTGATGTACCATTGACTGAAATGTCAGGGACTGAGGGGAAAGATGGGGAGTTGAAAAGGAGAAAACTTCAAAGGAACAAGCAGGTATTGAAAGATCAATTTGATGAATGGGAAGAGGCATATGTACTTGAGAATGAGCAGCGTAAGATTGATGAAATGTTCATGAGGGAAGCATTGTTGGAAGCCAAAAAGGCTGCCAATGCTTGGGAGGTGCCTGTTGGGGCTGTGCTGGTACAGCATGGCAAAATTATCGCCCGTGGATGTAACCGAGTGGAAGAGTTAAGGGACTCAACTGCCCATGCAGAAATGATTTGTATACGGGAGGCTTCAAACCTACTCCGGACATGGAGGCTTTCGGAGACTACACTTTATGTAACACTCGAACCATGTCCTATGTGTGCTGGAGCAATACTACAAGCTAGAATTGACACCCTTGTGTGGGGAGCTCCCAATAAACTTCTTGGGGCTGATGGCAGCTGGATTAGACTTTTTCCTAATGGGGGTGAAGGTGGAAGTGGCTCAGAACTGACAGATAAAACACAAGCTCCAGCCCACCCATTCCACCCAAAGATGACAATTCGGCGTGGGGTATTGGCATCAGAATGTTCAGATGCAATGCAGCAGTTCTTCCAACTCAGGAGAAAGCAGAAGGAGAAGAAACCAGATATGCCCGCCCCACCTTCATGCTTGCCCATTTCAAATCATCCTTCTAAGTTCATGACTAAGATGCATGGCATCTTCCACATGTTCTGTTTATAA 4077 0.4481 MHSTYLGSTITLRSKGSLFFSFDDHSYLFNERFDRTPLTSSSSCCACCGANFIHGVPINPGFLYGLRQSTLIQWAPSRRLILGAGDRYYCRLPDRGCYEVCCTLKERSGNGGGGRRRRGKIECMVSEGKSGRCHLGGEADAEAVLNLLSEEVSERCYGARETHGSSYERVRAEKRGDLGNECYRRKKKNVGLGSLECSSKRESQSIIVGSREEGHRRREEKEASVRIENRGLRKEGSSCSSYYSLSSLGDSESNTGDIEGNQEAPVKHRGIVRESSSGYKKDSWKTEEGNVDSEVVEKFEKQRDEAEGYGEVAKWGNTSVGSYVVGSGVEWERRKKSEKKLAEVSIERTESMEETSEMDSKVSQIHESGFGKSSGYRKQFHGRGEKLTVAGNLDEETRKQYGQKGKLVIGQSESGRKYQRLTESSEVQGSDVERTSGSQKQFSGSEENVTTAKNLVQGRGEEHGKKDAHITVQDKLKRNSQQFSETSRTQEVDVRNTSTSLRQSGTTMKNWNENSTSFLGSVQETKGQQHQTGEWITGGINSRRNFQQFTEISDIHDSDIRNNSISQTQYETRMNKQEGNWNLVSSSHPEAKEQHLQTDKTTIRRNESRKGYQDATSMSVVHASTTETGANPQRTSEKRVSNQEVNLTSVVKSVEETRERYYQADERLVQTRSREEVEKPSKQLHFIESAPGDSSSSQASLNLVAQARVQQIAAEERDKTSSQATLKPPPFQSVERGPLHVELTSGFAAQEVSGETPESGFSASSTLPPTRSPTWQREPHGEARRGETYGEPLNVAPGDVLASADRLEKSSMHFVGEFVEKVRHDVFTSEIQKERVSEANLLYKGEVPEKHKQKGSSHYGSENLQLKEHDSRRSSGASGTKGPSDEMWDVANPSLQEPPKTEAEEGTTTTGTAIVRRTGRSFWSVIADIVRMRWVSHSETHNSAMKSGGRSSSNESAGSDAWFSGREPDEHNDENAKREKRSVQQESISNDQPQLGKTPTLNQGEGSQATSTKDQKKHAELDMPSSSILESGLVLKSNSSASGKESLGWYENAESFQGSPSSSAVVESALPTPGRDIRRSPTVEEISSSTKPVGSGSGSMEGMDQKADVPLTEMSGTEGKDGELKRRKLQRNKQVLKDQFDEWEEAYVLENEQRKIDEMFMREALLEAKKAANAWEVPVGAVLVQHGKIIARGCNRVEELRDSTAHAEMICIREASNLLRTWRLSETTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPNGGEGGSGSELTDKTQAPAHPFHPKMTIRRGVLASECSDAMQQFFQLRRKQKEKKPDMPAPPSCLPISNHPSKFMTKMHGIFHMFCL* 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0240 1358 Gene3D Cytidine Deaminase, domain 2 1144 1330 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 592 611 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 1054 1104 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 986 1010 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 844 913 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 415 455 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 941 960 - -
Vvi1g0240 1358 Coils Coil 1126 1146 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 712 734 - -
Vvi1g0240 1358 Pfam MafB19-like deaminase 1158 1257 IPR028883 GO:0002100|GO:0008251
Vvi1g0240 1358 Hamap tRNA-specific adenosine deaminase [tadA]. 1161 1320 IPR028883 GO:0002100|GO:0008251
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 458 474 - -
Vvi1g0240 1358 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1129 1323 - -
Vvi1g0240 1358 FunFam tRNA-specific adenosine deaminase 1150 1331 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 588 641 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 334 512 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 670 699 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 751 773 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 612 641 - -
Vvi1g0240 1358 CDD nucleoside_deaminase 1161 1268 - -
Vvi1g0240 1358 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1155 1277 IPR002125 -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 334 361 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 475 512 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 964 985 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 378 402 - -
Vvi1g0240 1358 Coils Coil 1149 1169 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 1054 1068 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 844 875 - -
Vvi1g0240 1358 Coils Coil 1358 1358 - -
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 751 796 - -
Vvi1g0240 1358 SUPERFAMILY Cytidine deaminase-like 1137 1323 IPR016193 GO:0003824
Vvi1g0240 1358 MobiDBLite consensus disorder prediction 941 1025 - -