Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0233 ATGGCGGTTCACCTGAACTGGTCTTTACCTACTAAGTCTTCCCTCGATTTCCTCCATCGGACCTTCCAAGAAGCTCCGGCTCCTCCCAGACTCCTCTCCGTCCGATCTCAAAAGCTCAGCTCCGGTTCTGGAGATCCATTCCTTTCTAATGCGTCCGGGTTCGGACCTAGGAAATCCGCGAATTTGGATCGTCCAGAAGCTTCGATCGGATCTTCTGGTTCCTCTTCGTCTTCGGTTATTGATTTCCTCACATTGTGTCATTCGCTCAAGACCACAAAAAGGAAGGGATGGATCAATAATGGGATAAAAGGTCCGGAGTCTATTGCTGATCACATGTACCGCATGGCATTGATGGCGTTGATTGCTGGTGACCTTCATGGTGTGAACAGGGAAAGGTGTATTAAGATAGCAATTGTGCATGATATTGCAGAAGCTATTGTTGGAGATATAACACCATCTGATGGCATTCCTAAAAAAGAAAAGAGCAGACTAGAGCGGGCAGCTTTAAAGGAAATGTGTGAAGTTCTTGGTGGAGGGATTAGAGCTGACGAGATCAAAGAACTATGGGAGGAGTATGAAAATAACTCTTCCTTAGAGGCTAATCTTGTAAAAGATTTTGACAAAGTTGAGCTGATTTTGCAAGCACTGGAATATGAAATGGAACATGGTAAGGTCCTGGATGAGTTTTTCCATTCAACTGCAGGAAAATTTCAGACTGAAATAGGAAAAAGTTGGGCAGCTGAGATCACTTCAAGGAGAAATTCATGGTTGGGAAACAGGCCGAACTGA 789 0.4461 MAVHLNWSLPTKSSLDFLHRTFQEAPAPPRLLSVRSQKLSSGSGDPFLSNASGFGPRKSANLDRPEASIGSSGSSSSSVIDFLTLCHSLKTTKRKGWINNGIKGPESIADHMYRMALMALIAGDLHGVNRERCIKIAIVHDIAEAIVGDITPSDGIPKKEKSRLERAALKEMCEVLGGGIRADEIKELWEEYENNSSLEANLVKDFDKVELILQALEYEMEHGKVLDEFFHSTAGKFQTEIGKSWAAEITSRRNSWLGNRPN* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0233 262 Pfam HD domain 86 244 IPR006674 -
Vvi1g0233 262 PANTHER UNCHARACTERIZED 11 259 IPR039356 GO:0002953
Vvi1g0233 262 SUPERFAMILY HD-domain/PDEase-like 78 257 - -
Vvi1g0233 262 FunFam HD domain-containing protein 2 67 257 - -
Vvi1g0233 262 SMART hd_13 104 221 IPR003607 -
Vvi1g0233 262 Gene3D Hypothetical protein af1432 67 259 - -
Vvi1g0233 262 ProSiteProfiles HD domain profile. 108 212 IPR006674 -
Vvi1g0233 262 MobiDBLite consensus disorder prediction 36 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0233 Vvi-Chr1 2197499 2201727 Dispersed/Tandem