Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0216 ATGGTTACCCGCAACGGTGAGAGAAGCTTTCACGGCGATAGCCACGAGAGCGGCACCTTCTCCGTCGAGGAAAATCCGGCGAGCAGGACTATGACTATAGAGGACGAAGATCACGGCGATGGTGGTCGTCGTCTTGATTCAGATGATAAGTTGCCGTCGGTGGAGATGATATTTAAGGGGCAGGTGGAGCCCTCCTGGAGGGAGCAGCTGACTATTAGGGCTTTTGTTGTGAGCTTCGTGTTGGGTGTGCTCTTCACTTTCATAGTGATGAAGCTCAATTTGACCACTGGGATTATTCCCTCTCTGAATGTTTCCGCTGGCTTGTTGGGGTTCTTCTTCCTGAAGTCATGGACCAAGTTGATGGAGAAGTCTGGGTTGTTGAAGCAGCCCTTCACCAGGCAGGAGAACACCGTCATTCAGACTTGTGTCGTCGCCACCTCCGGCATCGCCTTCAGCGGAGGCTTTGGGAGCTACCTCTTTGGAATGAGCTCCACTGTGGCAGGTCAGTCATCAGAGACCAACGCTGCCCAGAATACCAAGGATCCAAGCTTGTCATGGATAATTGGGTTTCTGTTTGCCGTTAGTTTCCTTGGTCTCTTCTCCGTTTTGCCTCTACGAAAGATCATGATTATAGACTACAAATTGACATACCCTAGTGGCACTGCAACTGCTCACCTTATCAACAGCTTCCATACTCCTCAAGGAGCCAAGCTAGCCAAGAAACAAGTAAGAACTTTGGGCAAGTTTTTCTCCTTCAGCTTTCTGTGGGGTTTCTTCCAATGGTTCTTTACTGCTGGGGATGGATGTGGATTTGTAAACTTCCCCACATTTGGCCTGAAAGCCTTTGACAACAGGTTTTACTTCGACTTCTCAGCTACATATGTTGGCGTAGGGATGATCTGTCCTTACTTAATCAACATATCTGTATTAGTTGGTGCAATTCTGTCATGGGGCCTAATGTGGCCTCTCATAAAAAACAGGAAGGGGGATTGGTACTCATCCGAGCTTAGTGAAAGCAGTCTCCATGGCCTCCAAGGTTACCGGGTCTTCATCTCTATTGCAATGATCCTTGGTGATGGCCTCTACAACTTTATCAAGGTTCTTGGCCGAACGATTCAGGGCTTCATCAAACAATATAAAAAGAAGGAAGTTATACCTGTTACTGAACGAGACTCTCCTCAGAAAGTATCCAACTCTTATGATGACGAGGTCCGGACCAAACTCTTCCTCAAGGACGGAATACCAATGTGGGTATCATTCGCTGGCTATGTTGCAATTGCTGCCGTTTCCATGGGAGTAATTCCTAAAATTTTCCATCAGATGAAATGGTACTATGTCCTGGTCATATACATAGTCGCTCCAGCTCTAGCCTTCTGTAATGCATATGGGGCTGGGCTGACTGACTGGTCACTTGCCTCAACTTATGGAAAGCTTGCCATTTTCGCCATTGGAGCATGGGCCGGAGAATCTCATGGAGGTGTCCTTGCAGGTCTTGCCGCATGTGGGGTTATGATGAATATTGTATCAACAGCTTCTGACCTAATGCAGGACTTCAAAACTGGGTACATGACTAGATCTTCCCCCAGATCCATGTTTTTCAGCCAAATAATTGGAACTGCGATGGGCTGCCTCATCTCCCCATGTGTCTTTTGGCTCTTCTACAAGGCTTTCAAAGATCTAGGCTCACCGGAGTCACAGTACCCTGCACCTTATGCTGCTGTCTACAGAAGCATGTCAATCCTGGGTGTTGAAGGCTTTGGGGCTTTGCCCGATCACTGCCTCACCCTTTGCTATGTCTTCTTCTTCGGCGCCATCATTATCAACCTCATCAGGGATACTATTGCAAAGAAGTGGGCAAAGTACATCCCCCTTCCAATGGCCATGGCTATACCATTTTATCTCGGCTCCTACTTTGCCATTGACATGTGCGTTGGAAGCTTGATCCTCTTTATCTGGGGCAAGCTGAACAAGGCCAAGGCAGACGCTTTTGGACCAGCTGTTGCTTCTGGTTTGATATGTGGCGATGGAATATGGACTTTGCCCAGTTCCATCCTAGCTTTGGCTGGGGTGCAACCACCCATCTGCATGAAGTTTCTGTCAAGGGGAACAAACTCCATGGTGGATAAATTCTTAAGTTCTTAG 2142 0.4781 MVTRNGERSFHGDSHESGTFSVEENPASRTMTIEDEDHGDGGRRLDSDDKLPSVEMIFKGQVEPSWREQLTIRAFVVSFVLGVLFTFIVMKLNLTTGIIPSLNVSAGLLGFFFLKSWTKLMEKSGLLKQPFTRQENTVIQTCVVATSGIAFSGGFGSYLFGMSSTVAGQSSETNAAQNTKDPSLSWIIGFLFAVSFLGLFSVLPLRKIMIIDYKLTYPSGTATAHLINSFHTPQGAKLAKKQVRTLGKFFSFSFLWGFFQWFFTAGDGCGFVNFPTFGLKAFDNRFYFDFSATYVGVGMICPYLINISVLVGAILSWGLMWPLIKNRKGDWYSSELSESSLHGLQGYRVFISIAMILGDGLYNFIKVLGRTIQGFIKQYKKKEVIPVTERDSPQKVSNSYDDEVRTKLFLKDGIPMWVSFAGYVAIAAVSMGVIPKIFHQMKWYYVLVIYIVAPALAFCNAYGAGLTDWSLASTYGKLAIFAIGAWAGESHGGVLAGLAACGVMMNIVSTASDLMQDFKTGYMTRSSPRSMFFSQIIGTAMGCLISPCVFWLFYKAFKDLGSPESQYPAPYAAVYRSMSILGVEGFGALPDHCLTLCYVFFFGAIIINLIRDTIAKKWAKYIPLPMAMAIPFYLGSYFAIDMCVGSLILFIWGKLNKAKADAFGPAVASGLICGDGIWTLPSSILALAGVQPPICMKFLSRGTNSMVDKFLSS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0216 713 Pfam OPT oligopeptide transporter protein 69 685 IPR004813 GO:0035673
Vvi1g0216 713 MobiDBLite consensus disorder prediction 29 48 - -
Vvi1g0216 713 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 48 700 IPR045035 GO:0035673
Vvi1g0216 713 MobiDBLite consensus disorder prediction 1 48 - -
Vvi1g0216 713 NCBIfam OPT family oligopeptide transporter 67 686 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0216 Vvi-Chr1 1989837 1993774 Dispersed/Tandem