Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0215 ATGGTTACCCATAACGCTGAGAGAGGCTTCCACGGCGACAGCCATGAGAACGCCACCTTCGCCGTCGAGGAAACTCGGTCGAGCGGGACTATGATGATAGAGAACGAACGTTATGGCAATGGTGAAGGTGGTGGTGATTCAGATGATAAGTCGCTGTCGGTGGAGATGCTGTTTAAGGGGAAGGTGGTGCCTTCCTGGAGGGAGCAGCTGACCATTAGGGCTTTTGTTGTGAGCTTCGTGTTGGGTGTGCTCTTGACTTTTATAGTGATGAAGCTCAATTTGACCACTGGGATTATTCCTTCTCTGAATGTTTCCGCTGGGCTGTTGGGGTTCTTCTTCGTGAAGTCATGGGCCAAGTTCATGGAGAAGTCTGGGATGTTGAAGCAGCCCTTCACCAGACAGGAGAACACCGTTATTCAGACTTGTGTCGTCGCCACCTCCGGCATCGCCTTCAGCGGAGGCTTTGGGAGCTACCTCTTTGGAATGAGCTCCATTGTGGCAGGTCAGTCAGCAAAGTCCATCGATGCCCAGAACACCAAGGATCCAAGATTGCCTTGGATAATTGGGTTTCTGTTTGCCGTTAGTTTCCTTGGTCTCTTCTCCGTTTTGCCTCTTCGAAAGATCATGGTTATAGACTACAAATTGACATACCCTAGTGGCACTGCAACTGCCCACCTTATCAACAGCTTCCATACTCCTCAAGGAGCCAAGCTAGCCAAGCAACAAGTAAGAACTCTGGGCAAGTTCTTCTCCTTCAGCTTTCTGTGGGGTTTCTTTCAATGGTTCTTTACTGGTGGGGATGGATGTGGATTTTCTAACTTCCCCACATTTGGCCTAGAAGCCTATGAGAACAGGTTTTACTTCGACTTCTCAGGTACATTTGTTGGAGTAGGGATGATCTGTCCTTACTTAATCAACGTATCTGTGTTAGTTGGAGCAATTCTGTCATGGGGCCTAATGTGGCCTCTCATAAAAAACAGAAAGGGGGATTGGTACTCAGCCATGCTTAGTGACAGCAATCTCATGGGCGTCCAAGGTTATCGGGTCTTCCTTTCTATTGCAATGATCCTTGGGGATGGCCTCTACAACTTCGTCAAGGTTCTTGGCCTAACTATTCGGGGCTTCATCAAACAATATAAAAAGATGGAAGTTATACCTGTTACTGAACGAGGCTCTCCTGAGAAAGTATCCAACTCTTACGATGACGAGGTCCGGACCAAACTCTTCCTCAAGGACGGAATTCCATTATGGGTATCAATCGTTGGCTATGTTGCTATTGCTGCCGTTTCCATAGGAGTAATTCCTAAAATTTTCCATCAGATGAAATGGTATTATGTCCTGGTCATATACATCTTTGCCCCAGTTCTAGCCTTCTGTAATGCATATGGGTGTGGGCTGACTGACTGGTCACTTGCCTCCACTTATGGAAAGCTTGCCATCTTCGCCATTGGAGCATGGGCAGGAGAATCTCATGGAGGTGTCCTTGCAGGTCTTGCTGCATGTGGGGTTATGATGAATATTGTGTCAACAGCTTCTGACCTAATGCAGGACTTCAAGACTGGGTACATGACTCTAGCCTCCCCCAGGTCCATGTTTGTGAGCCAAGTGATTGGAACTGCAATGGGCTGCATCATCTCTCCATGTGTCTTTTGGCTCTTCTACAAGGCTTTCGTTGATATAGGCTCACCGGATTCAGATTACCCTGCACCTAATGCTCTTGTCTACAGAAACATGTCAGTCCTGGGTGTTGAAGGCTTTGGGTCCCTGCCCGATCACTGCCTCACCCTTTGCTATATCTTATTCGCCGGCTCCATCGTTATCAACCTCATCAGGGATACTGTTGCAAAGAAGTGGGCAAAGTACATCCCCCTTCCAATGGCCATGGCTATACCATTCTATCTCGGTCCCTACTTTGCCATTGACATGTGCGTTGGAAGTTTGATCCTCTTTATCTGGGGCAAGTTGGACAAAGCCAAGGCAGACGCTTTTGGACCAGCTGTAGCGTCTGGTTTAATATGCGGCGATGGAATATGGAGTTTGCCCAGTTCGATCCTAGCTTTGGCTGGGGTGCAACCACCCATCTGCATGAAGTTTTTATCAAGAGGAACAAATGCCAGGGTGGATCAATTCTTAAGTCCTTAG 2142 0.4785 MVTHNAERGFHGDSHENATFAVEETRSSGTMMIENERYGNGEGGGDSDDKSLSVEMLFKGKVVPSWREQLTIRAFVVSFVLGVLLTFIVMKLNLTTGIIPSLNVSAGLLGFFFVKSWAKFMEKSGMLKQPFTRQENTVIQTCVVATSGIAFSGGFGSYLFGMSSIVAGQSAKSIDAQNTKDPRLPWIIGFLFAVSFLGLFSVLPLRKIMVIDYKLTYPSGTATAHLINSFHTPQGAKLAKQQVRTLGKFFSFSFLWGFFQWFFTGGDGCGFSNFPTFGLEAYENRFYFDFSGTFVGVGMICPYLINVSVLVGAILSWGLMWPLIKNRKGDWYSAMLSDSNLMGVQGYRVFLSIAMILGDGLYNFVKVLGLTIRGFIKQYKKMEVIPVTERGSPEKVSNSYDDEVRTKLFLKDGIPLWVSIVGYVAIAAVSIGVIPKIFHQMKWYYVLVIYIFAPVLAFCNAYGCGLTDWSLASTYGKLAIFAIGAWAGESHGGVLAGLAACGVMMNIVSTASDLMQDFKTGYMTLASPRSMFVSQVIGTAMGCIISPCVFWLFYKAFVDIGSPDSDYPAPNALVYRNMSVLGVEGFGSLPDHCLTLCYILFAGSIVINLIRDTVAKKWAKYIPLPMAMAIPFYLGPYFAIDMCVGSLILFIWGKLDKAKADAFGPAVASGLICGDGIWSLPSSILALAGVQPPICMKFLSRGTNARVDQFLSP* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0215 713 NCBIfam OPT family oligopeptide transporter 68 686 IPR004813 GO:0035673
Vvi1g0215 713 Pfam OPT oligopeptide transporter protein 69 685 IPR004813 GO:0035673
Vvi1g0215 713 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 50 700 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0215 Vvi-Chr1 1973859 1978367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0215 42 628 Organic Solute Cotransporters AT1G09930 21.139 2.40e-06 48.9