Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0210 ATGTCTCTCCTCGCTGATCTCCAGAACATCAACCTCAGTGACTCCACGGAGAAGATTATCGCCGAATACATATGGATCGGCGGATCCGGAAATGATTTGAGGAGTAAAGCAAGGACCCTCTCCGGTCCGGTCACTGGCCCAGCGCAACTGCCGAAGTGGAACTACGATGGATCCAGCACCGGCCAGGCTCCCGGCGAAGACAGTGAAGTCATTTTATACCCTCAGGCGATCTTTAAGGATCCCTTCAGAGGAGGAGACAATATTCTGGTCATGTGCGATGCCTACACTCCAGGGGGCGAACCAATCCCGACAAACAAGAGATTCAATGCTGCCAAGATTTTTAGCCATCCTGAAGTGACCGCCGAGGAGCCTTGGTATGGCATTGAGCAAGAATATACTCTTCTTCAGAAGGACGTCAACTGGCCGCTTGGATGGCCAGTTGGCGGCTTCCCTGGCCCTCAGGGGCCATACTACTGTGGAATTGGGGCTGACAAGGCCTTTGGTCGTGACATAGTAGATGCTCACTACAAGGCATGCCTGTATGCTGGAATCAACATTTCTGGAATCAATGGAGAGGTCATGCCTGGGCAGTGGGAATTCCAAGTTGGGCCTGCAGTTGGGATCTCTGCTGGTGATGAATTATGGGTTGCCCGGTACATTCTGGAGAGGATTACAGAAATCGCTGGAGTTGTCGTTTCATTTGACCCAAAACCTATCAAGGTCTACTGGAATGGTGCTGGAGCTCACACCAACTATAGCACGAAATCCATGAGGAATACTGGTGGATATGATGTGATTAAAAAGGCAATTGAAAAGTTGGGTTTGCGCCACAAGGAGCATATTTCAGCTTATGGAGAGGGTAATGAGAGAAGATTGACTGGTCGCCATGAAACAGCTGACATCAACACTTTCTGTTGGGGTGTTGCCAACAGAGGTGCCTCTATCCGTGTTGGCCGTGACACTGAAAAGGAAGGAAAAGGTTACTTTGAAGACAGAAGACCTGCTTCCAACATGGATCCATACGTTGTCACTTCCATGATCGCCGAGACCACCATCCTCTGGAAGCCTTAG 1071 0.5005 MSLLADLQNINLSDSTEKIIAEYIWIGGSGNDLRSKARTLSGPVTGPAQLPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGDNILVMCDAYTPGGEPIPTNKRFNAAKIFSHPEVTAEEPWYGIEQEYTLLQKDVNWPLGWPVGGFPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSFDPKPIKVYWNGAGAHTNYSTKSMRNTGGYDVIKKAIEKLGLRHKEHISAYGEGNERRLTGRHETADINTFCWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0210 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Vvi1g0210 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Vvi1g0210 356 Pfam Glutamine synthetase, beta-Grasp domain 22 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Vvi1g0210 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 14 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vvi1g0210 356 FunFam Glutamine synthetase 104 356 - -
Vvi1g0210 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Vvi1g0210 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 356 - -
Vvi1g0210 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
Vvi1g0210 356 PANTHER GLUTAMINE SYNTHETASE 7 354 - -
Vvi1g0210 356 FunFam Glutamine synthetase 3 103 - -
Vvi1g0210 356 SUPERFAMILY Glutamine synthetase/guanido kinase 103 352 IPR014746 GO:0003824
Vvi1g0210 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vvi1g0210 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Vvi1g0210 356 Pfam Glutamine synthetase, catalytic domain 168 254 IPR008146 GO:0004356|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0210 Vvi-Chr1 1923817 1927783 Dispersed/Transposed