Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0201 ATGTGTGAATCTTGTGTTTCTGCTGATGCACATTCCAATCATAAAAAACTGCAAATATATAAGCATGTGCATAAAGATGTTGTTCTCCTCGCCGACATGCAGAAGCATATAGACTGTTCTCAAATCCAGCCTTATAGATGCAATGGTAAGAAAGTTTTAGCCGTAAACCCTCTTCCGCACTCTGGACGGGAACTGAATTCTGGTGAAATGTGCAAAGTTTGCCATCGGATCATATTTAAACCAAGCATCTATACCTACTGCTCTATCTCATGCAAGGTCGCAGCAGTTTCTACAAATCTGACCAGTTCAGATCCTCCCTATCTTGCCCCAAAAAAGCCAAAAAAGAAGCCCCCACCAAAGCCAAGTGTGAATAAGACACAGAGTCCCCCGAAGAGGGTGAATAAGAGAAAAGGGGTGCCTAGCAGAGCACCTTTCTTTTAA 441 0.4286 MCESCVSADAHSNHKKLQIYKHVHKDVVLLADMQKHIDCSQIQPYRCNGKKVLAVNPLPHSGRELNSGEMCKVCHRIIFKPSIYTYCSISCKVAAVSTNLTSSDPPYLAPKKPKKKPPPKPSVNKTQSPPKRVNKRKGVPSRAPFF* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0201 146 Pfam PLATZ transcription factor 21 93 IPR006734 -
Vvi1g0201 146 MobiDBLite consensus disorder prediction 100 146 - -
Vvi1g0201 146 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 145 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vvi1g0201 PLATZ 7.7e-19 No_clan