Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0195 ATGATCAACCCTAGCAGCAACTTCACCCCTCTTCCCTCTCATGGCATCGCCCGGAACTTCGTTTCCCGGCGACTCCTCTTCTTGCCTGAGATCCAAGTGATGGAGGTTCTTGTGGCTCTCATTGTGTTTGTGGCTATACATTCCCTAAGGCAAAGGAAGCGCCATGGCCTGCCGGTTTGGCCTTTTCTTGGGATGTTGCCTTCTCTTGTTGGGGGTCTCCGGACCGACATGTATGAATGGATTTCCGGCGTTCTTTGCCGTCGGAATGGGACGTTTGTGTTTAAGGGTCCTTGGTTTAGCAGCCTCAACTGTGTGGTCACTTCGGATCCTCGCAACATAGAGCATCTCCTCAAGGGTAAATTCTCTAACTTCCCCAAAGGAGCCTACTTTAGAAACACGGTCAGAGACCTGCTCGGGGACGGCATATTTAGCGCCGACGATGAGACCTGGCAGCGCCAGAGGAAGACGGCAAGCATTGAGTTCCACTCGGCGAAGTTCCGAAAACTCACCATTGAGTCGCTGTTGGTGCTGGTCCACTCCAGACTCCTCCCAGTGCTTGAAGATTCAGTCAAAAACTCAGCCTCTATCGACCTCCAAGACGTGCTCTTGAGGCTCACCTTCGACAATGTCTGTATGATAGCATTTGGCGTCGACCCCGGGTGTCTCCGCCTAGGCCTACCGGAAATTCCATTTGCTCGAGCATTCGAGGACGCCACAGAAGCCACGGTTCTTCGCTTCGTTACACCCACATGCATATGGAAGGCCATGAGGCACCTCAACATAGGCACCGAGAAGAACCTCAAGATATCGATAATGGGGGTCGATAAATTTGCAAATGAAGTGATCACAACAAGGAAGAAGGAGCTTTCGTTACAGTGTGACGACAAGAACCAGAGGTCCGATCTGTTGTCAATCTTCATGGGGTTGAAGGATGAAAATGGACAGCCATTTTCGGACAAATTTTTGAGGGATATATGCGTGAACTTCATACTTGCCGGTAGAGACACTTCCTCGGTGGCGCTGAGTTGGTTTTTCTGGCTCCTTGATCGGAATCCGGCGGTGGAGGAGAGGATCATGGCGGAGATATGCAGGATGGTGGGTGAAAGGAAAGGTGAAGAAGAGGGAGATGGTTTGATATTCAAGGCTGAGGAGGTGAAGAAAATGGAGTATCTGCAAGCTGCTCTATCAGAGGCACTCAGGTTGTATCCATCAGTGCCTGTGGATCACAAAGAGGTGATTGAAGACGATGTATTTCCAGATGGGACTGTGTTAAAGAAAGGAACCAAAGTGGTGTATGCCATTTATGCCATGGGAAGAATGGAGGGGATATGGGGAAAGGATTGCAGGGAGTTCAAGCCCGAGAGGTGGCTCCGAGACGGCCGGTTCATGAGCGAGTCAGCCTACAAGTTCACCGCCTTCAATGGCGGACCTCGGCTTTGCCTAGGGAAAGATTTTGCTTACTATCAGATGAAATTCGCTGCTGCGTCTATAATATACCGTTACCATGTCAAGGTGGTGGAAAATCATCCAGTTGAGCCGAAGCTTGCATTGACAATGTACATGAAGCATGGGTTGAAGGTGAATCTGATCCGGCGCCATGAGTCTGAGCTCCAGAAGTACCTGAAAATCAGAAACTAA 1638 0.5018 MINPSSNFTPLPSHGIARNFVSRRLLFLPEIQVMEVLVALIVFVAIHSLRQRKRHGLPVWPFLGMLPSLVGGLRTDMYEWISGVLCRRNGTFVFKGPWFSSLNCVVTSDPRNIEHLLKGKFSNFPKGAYFRNTVRDLLGDGIFSADDETWQRQRKTASIEFHSAKFRKLTIESLLVLVHSRLLPVLEDSVKNSASIDLQDVLLRLTFDNVCMIAFGVDPGCLRLGLPEIPFARAFEDATEATVLRFVTPTCIWKAMRHLNIGTEKNLKISIMGVDKFANEVITTRKKELSLQCDDKNQRSDLLSIFMGLKDENGQPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDRNPAVEERIMAEICRMVGERKGEEEGDGLIFKAEEVKKMEYLQAALSEALRLYPSVPVDHKEVIEDDVFPDGTVLKKGTKVVYAIYAMGRMEGIWGKDCREFKPERWLRDGRFMSESAYKFTAFNGGPRLCLGKDFAYYQMKFAAASIIYRYHVKVVENHPVEPKLALTMYMKHGLKVNLIRRHESELQKYLKIRN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0195 545 FunFam Cytochrome P450 48 535 - -
Vvi1g0195 545 Gene3D Cytochrome P450 42 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS E-class P450 group I signature 470 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS E-class P450 group I signature 480 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PANTHER CYTOCHROME P450 45 527 - -
Vvi1g0195 545 SUPERFAMILY Cytochrome P450 56 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS P450 superfamily signature 471 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS P450 superfamily signature 480 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 CDD CYP86A 92 525 - -
Vvi1g0195 545 Pfam Cytochrome P450 98 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g0195 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 473 482 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0195 Vvi-Chr1 1748732 1751009 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g0195 21 540 Cytochrome P450 AT5G23190 75.000 0.0 823