Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0191 ATGCTGGGTGCATTGCCAATCTTGCCCCTTCCAGCAACTCCCTCAGATGGGAATCTTGGCTCTCTTCCCCTATCTCAGCTGCAGGTTCAGTTGCAACCCACACAGGGACCATTGGAATCATACATCCTCCTCCAGACATTAGAAACATTGTTGACAAGACTGCACGGGGCTGCTGTAACCCAGGGCAGCAGTTTTGGTGCAGTTGAAAGCGTGAAGGCCACAAGTGATATAAACTCTCCTGTTTCTGGAAAAGTGGTTGAAGTTAATGAAGAGCTTAACAGCTCACCCGGTTTGCTGAGTCCTCAAATGCTTGGAAGAGAACCAATTTGCACAAGTAAATTAAAGATTTTGGCAAACTTCCCAATAATGGTTAATGCGAGCCCATATGAAAATGGGTGGATTATAAAGGTGGAGATGAGTGACACCGGTGAATTAAATTCTTTGATGGACTTAGAACAGTACACCAAGTTTTGTGAAGAAGAAGATGCCAAGCATTGA 498 0.4478 MLGALPILPLPATPSDGNLGSLPLSQLQVQLQPTQGPLESYILLQTLETLLTRLHGAAVTQGSSFGAVESVKATSDINSPVSGKVVEVNEELNSSPGLLSPQMLGREPICTSKLKILANFPIMVNASPYENGWIIKVEMSDTGELNSLMDLEQYTKFCEEEDAKH* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0191 165 Pfam Glycine cleavage H-protein 55 102 IPR033753 -
Vvi1g0191 165 Pfam Glycine cleavage H-protein 117 160 IPR033753 -
Vvi1g0191 165 SUPERFAMILY Single hybrid motif 56 112 IPR011053 -
Vvi1g0191 165 PANTHER GLYCINE CLEAVAGE SYSTEM H PROTEIN 49 162 IPR002930 GO:0005960|GO:0019464
Vvi1g0191 165 SUPERFAMILY Single hybrid motif 117 160 IPR011053 -
Vvi1g0191 165 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 56 85 IPR003016 -
Vvi1g0191 165 Gene3D - 28 165 - -
Vvi1g0191 165 CDD GCS_H 56 137 IPR033753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0191 Vvi-Chr1 1723811 1725664 Proximal