Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0187 ATGGACCACGGGGAAGGAGAAGACTGCAACGCTTTTCCCTACGACGAATCTTTCTACGACCTTTCAGAGAGCATAAACGGATTAATCTGCTTGAACGGCCCCAAACCCCGATTCTGCAATCTAAGCACCAGAGAGTCTGTGACGCTGCCGCCCTCAAGATTAAGCTTCCCAGAATCATGCTTCTCATTGGGCTTTGACTCTTGCAGCAACACCTACAAAATCTTGAAGGCTTCGATAACCTATCAGCCAGGGAGTTGCGTATGCGAGATTCTCACTCTCGGCTCCAAAACATGGAGGGAAGTTACAGTTGATTCTTATTATTTCCCTGTCCTTAAGTACCTGCAGATTATATGCGTCCTTGGAAGTCTGTATTGGGATCATGAGCTCTTAGACGCAATAGTGGCGTTTGGTCTGGTGGAGGAGAGGTTTCGACTGGTTCCACCACCGGCCGGTGTGCCCACTGCCCAGTACAGTTCTTTGGCACAGTTGGATGGGCGTCTGGTGATGGTGAATTACAGGGGTCTGATCAGTGGGGACACTATACCGATATGGGTACTGGAAGATGATCAAAATGGGATTTGGAGTATGAAGCAAAGAATTGTGTTTTCCTCTATTTCGAATGGGGTTTGGAGTATGAAGCAAAGAATTGTGCTCTCCTAG 660 0.4788 MDHGEGEDCNAFPYDESFYDLSESINGLICLNGPKPRFCNLSTRESVTLPPSRLSFPESCFSLGFDSCSNTYKILKASITYQPGSCVCEILTLGSKTWREVTVDSYYFPVLKYLQIICVLGSLYWDHELLDAIVAFGLVEERFRLVPPPAGVPTAQYSSLAQLDGRLVMVNYRGLISGDTIPIWVLEDDQNGIWSMKQRIVFSSISNGVWSMKQRIVLS* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0187 219 NCBIfam F-box protein interaction domain 24 208 IPR017451 -
Vvi1g0187 219 PANTHER BNAA05G37150D PROTEIN-RELATED 13 210 - -
Vvi1g0187 219 Pfam F-box associated domain 117 204 IPR013187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0187 Vvi-Chr1 1700112 1700771 Dispersed