Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0183 ATGATCATCATTAGTGAATTTGGTAGCATGTTCAGAAGAGCATCAATGGATTTGATGGGGGATGGTGGCACAGTTCCCGAATGTGGTGCAATCTTCATGTCAAACAGGAAAACAATGGAAGAATGTCTTAGACGGAACCTATTCGGCCTTCCATTTTCTAAGGCTGGATTTGTAAAACATGTCAAAGTGGGAATGGTTTTATTTTTATTTGAATATGAGAAGCGAGAACTTCATGGCGTATTCCAGGCAAGCACAGATGGTGCAATTGATATTGTTCCCGAGGCTTTCTGTTCATCTGGCAAACGGTTCTCTGCCCAGGTTCGCATTACAACAATCTGGAATTGCACTCCTCTGACTGAGCATGAATTCAGTGATGCTATTCGAGATAACTACTTTGCGGCAAACAAGTTCAACTTTGGTTTGTCCAAAGACCAGGTTCACAGGCTTCTATTGTTGTTTAGTTCTAAAAAGTTGAAAGATCTACAACCTCAGAGACAACTCAGAAGAAGTAATGTCTCAAAACCAGTCAGGAGCTCTTTAGGTAAAGTTCGAAGAGTAGATGCTAAAACTGGTCATAGGAAAGAAAATGTACATGGAGTGAACAATGATCTTTGGCCAGCCATCTTGACTGAGTACCCTGGGAATTCTTTGGGTAAAATAAGTAGACTTCCTGATGAAGCCAGTTTTGCAGTAAGTGATCAGGGAGAACGTCAACGTGCTTTGGAAAGAGATATTGGGCTGTTCATATCGACCGTGAAAGATGAAGTAATTAAAATACCTGACAGTGGCAGGTTTACAACGAGTGATAGGGTAGGAAATGATCGTATCACAGCTGAATACCAAGAGAAATCTTTGGGCAAAGAAAGAAGGGCATCCTATAATGGCAGGTATCCAACAAGTGATTGGGTTGAAAAAGATTATAATGTGGACCCTGATATTGCCCAGGGGCACATCAGAAACCCTTTAAAACAACCCAATGATCTTAAGCCAGTCTTGACAACTGAACGCCGTGAGAAATCTTTGGGCAAAGAAAGGATGGCTTATGTAGGCAGGCATTCAACGAGTGATTGGTTTGGAAATGAATGTAATGCTCACAGTGATCTTGGTGCGGTCATCTCAACTGAATACACCAGAAACTCTTTAAAACTATCCAATGATGACAGGTTTGAAATGAGTGGTAGATCAGGAAATCAACTTGATAGTGGGAATGATGATCTTGGGCCTGCCATCTCGGTTGAGTGCCTTGGCAACTCTTTGGGTGAAGTTAGAAGAGGACCTGATCCTGAGAGGTTTATGACAAGTGATAGGATAGGGAATGAAGGTCAGGTCAACGATGATCTTGGGCCAGCTATCTCAACTGGGATCCCAGTTAACCCCTTGGGTGATGCAAGAAGAGTGGTTGATGATAACAGGTTTATGGTAAGTAATAGAGTAAGAAATCAACTCCAGGTGGATGATGATCCTAGGATGGCCTTCTCGACTGAGTATTATAGGAACTCTTTGGGTGAAGCAAGAAGAGTAACTAATGTGGACAGGTTTGCAAAAAGTGATTGGGTGGGAAATGAATGTCAAATGGACAATAATATTGAGCCTGCCATCTCTACTGAATACTTATGTAAGCCTAACCTGAATAGGTTGGATTATTCTGGCAAACAAATTAAAGGAACTGATAATAGCTCAGCTCAACCTTATTTTGAATCATCAGCATTTTGCTTGAGAGAGCAAAGAACATCTTGTGAAGATACAATTGCCACAAGTACTGATCCTTACAGATCTGGAACACCCACTATTCACTATAGTGGCTTGCCATCTTGTGGGTTGTATCACAGTTCTAATTCTGTACAAGAATGCCCTCACTGCAGTTCTCTGGGTAATGCTTTTAGTTCACCTAAAAACAAATCACCTCCATTTCATGCAGAGTCCAGAGGTGTAACCAGATGCTTGGACATCACTTCTGGCCTTGGGAATTGTGTTTCTTCACCTACTCCCAATGATTACGAGTGTTCTTGCTATAGGACCACTATGCCATTCTCAGGGCCTGGATATTCTGAAAGCAAGGCTGTAGAATTCTCTGATCTTGAAGGTTACAGAGGCTCATCCTTTGCAGGGTCCTTACTTCCTGTGCCTCTCCTAAAGGGTGAAAATGATGGCCCTGCTCCATATTCCTTCTGGCCCATTGAGGAGACTCCATATGATTATGGGTATCCTGAAGCATCACACTACAAAAATAAACTACTTCCGAAAGGTGGGGATGGTGAAGCTTATGCTGCCAATGTTCCTCTGTCAAATGAGGTTCAATGCCACTCTCAAGGTGATCTTTGTTCTCTAGAGGCAAAAAGCTTGAACTTCCATGAAAACAATATGTCAGATCATGACTTCCAGTCAAGAAAAAAATTCAGAGGAATGTATTCTGCTCATCAAAAGAGCAGAAATAGTGTCTTTTCTCGCTTGACTTTTGCTGCTGAAGCGTGTGCAGAAGACAATGATAGCCCTGTGGACTACAATGAACATAATGTGGACACATCAGTGGATGAACTCATGGACATGTTGCATGACAGTAGTTATCACTGGGCAAAGAAATTGAGAAAGTCCAAACCATTAATTGGACATCATGATAATGGCGAAAACATTAGGAATAAGAAACTAAAAACCATCTACAGTGAGATGGAGAGGGATCAATGTACATTATTTCCGATACAGAAGAACATGGATGCTACTCTAGGCAATGGAGAGAGTGATCATGAAAGGACCAAAGGCAAGCCAGCAGTGCATTTCAAAAGGCGAAGTGAGACAGGGAAAAATAGGGATGAAATCAAGACTGGGGGGTTTGTTGAAAGTACAGGGAGCAATGGCTTGTTGGGTGCTCATCAGAAGAGGAGAAAACTAGTCCGGCCAAACTTCAGTAAAAATGAGCCTTCTCATGAGAAAGACGTCATTGGTGAAAACACTCCAAATCTACAGCTATCATCTCAAGAAAGCTCTTTCAGTAAAGATAATACTGGAAGTTGTGAGGCTTCGGATAGAAACCATGAAAACAAAAAGAATGTGGGGCAGCAAGCTGGTTTGCTGCATGCACCGTGTCAAGCAGGTTGTGAAGCTATCTCCACTGAAGCAAAAAGTGGTTCAGACAGCGAAGGAGGGAGGAAAGAAGAAAGCGGTTCAGGGTTGTCTCTTAAAAATGAAGGTGAAAATGGGAAAGAAGGTTCAAAAATTGAAGAGGCAAACCTTTCAGTTACTTGTAGAGATGAATCCATTGCCGAGGAATCCATGGGGCATGGATTATCTCAGGATCATGTTACTGAGAGCTGCTCCAATGTGCAAGAGTCATCTCTCAAGATATGTGAAGAAAATGCTGGAAGTGTAACTGGATTGGAAAGCGCTTGA 3384 0.4208 MIIISEFGSMFRRASMDLMGDGGTVPECGAIFMSNRKTMEECLRRNLFGLPFSKAGFVKHVKVGMVLFLFEYEKRELHGVFQASTDGAIDIVPEAFCSSGKRFSAQVRITTIWNCTPLTEHEFSDAIRDNYFAANKFNFGLSKDQVHRLLLLFSSKKLKDLQPQRQLRRSNVSKPVRSSLGKVRRVDAKTGHRKENVHGVNNDLWPAILTEYPGNSLGKISRLPDEASFAVSDQGERQRALERDIGLFISTVKDEVIKIPDSGRFTTSDRVGNDRITAEYQEKSLGKERRASYNGRYPTSDWVEKDYNVDPDIAQGHIRNPLKQPNDLKPVLTTERREKSLGKERMAYVGRHSTSDWFGNECNAHSDLGAVISTEYTRNSLKLSNDDRFEMSGRSGNQLDSGNDDLGPAISVECLGNSLGEVRRGPDPERFMTSDRIGNEGQVNDDLGPAISTGIPVNPLGDARRVVDDNRFMVSNRVRNQLQVDDDPRMAFSTEYYRNSLGEARRVTNVDRFAKSDWVGNECQMDNNIEPAISTEYLCKPNLNRLDYSGKQIKGTDNSSAQPYFESSAFCLREQRTSCEDTIATSTDPYRSGTPTIHYSGLPSCGLYHSSNSVQECPHCSSLGNAFSSPKNKSPPFHAESRGVTRCLDITSGLGNCVSSPTPNDYECSCYRTTMPFSGPGYSESKAVEFSDLEGYRGSSFAGSLLPVPLLKGENDGPAPYSFWPIEETPYDYGYPEASHYKNKLLPKGGDGEAYAANVPLSNEVQCHSQGDLCSLEAKSLNFHENNMSDHDFQSRKKFRGMYSAHQKSRNSVFSRLTFAAEACAEDNDSPVDYNEHNVDTSVDELMDMLHDSSYHWAKKLRKSKPLIGHHDNGENIRNKKLKTIYSEMERDQCTLFPIQKNMDATLGNGESDHERTKGKPAVHFKRRSETGKNRDEIKTGGFVESTGSNGLLGAHQKRRKLVRPNFSKNEPSHEKDVIGENTPNLQLSSQESSFSKDNTGSCEASDRNHENKKNVGQQAGLLHAPCQAGCEAISTEAKSGSDSEGGRKEESGSGLSLKNEGENGKEGSKIEEANLSVTCRDESIAEESMGHGLSQDHVTESCSNVQESSLKICEENAGSVTGLESA* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0183 1127 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 25 965 - -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 905 1012 - -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 964 978 - -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 908 940 - -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 1037 1106 - -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 1042 1056 - -
Vvi1g0183 1127 ProSiteProfiles DCD domain profile. 25 155 IPR013989 -
Vvi1g0183 1127 MobiDBLite consensus disorder prediction 980 1002 - -
Vvi1g0183 1127 SMART dcd 25 155 IPR013989 -
Vvi1g0183 1127 Pfam Development and cell death domain 29 153 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0183 Vvi-Chr1 1665411 1669053 Dispersed