Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0165 ATGTCTTCGACAGCTCCTCATCACGATGCAGAAGACCCCCCCCAGTTGCAGTCGAAGGATGGCAAGCTGATGGCTACGTTTAATCCCAGACAGCTGAACGTTATCTGGGGCGGAAACCTCCGCTACTGGAAGATGCCAGAAAAGAACAGCGGCAGTCCTGCAGAACTATTGCAGGTATGCTGGCTTGAAGTGAGCGGCAGTGTCCCCATACGCAGCGCATCAATTGGAACCAAGTTCAGAATTACCTTCCAAGTATCCTTCAAATCCGATGCATTTGGATGGAATAACTGTCCCGTTTATGTGATGGCTAAGTTTGGGAAGAAAGGAAAGTACGCGTGGACGAAAATATCGCTGCGTACTGACTATTCACAGCCAACCAATATCCTCCCACCTGAGGGCCTGGAGATTGTAACCAAAGATGCTCCAAATGTAAATGATACCATTTACTTTGGCCTATATGAAGTATGGAGTGGGAAGTGGAAGGGAGGATTAGAACTTCATAATGCCACGGTTGAACAAATGAATAATAAATAG 534 0.4682 MSSTAPHHDAEDPPQLQSKDGKLMATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCWLEVSGSVPIRSASIGTKFRITFQVSFKSDAFGWNNCPVYVMAKFGKKGKYAWTKISLRTDYSQPTNILPPEGLEIVTKDAPNVNDTIYFGLYEVWSGKWKGGLELHNATVEQMNNK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0165 177 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 16 169 - -
Vvi1g0165 177 Pfam Phloem protein 2 26 171 IPR025886 -
Vvi1g0165 177 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0165 Vvi-Chr1 1559961 1561101 Dispersed/Proximal