Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0159 ATGGAGAGCAGTGAAGAAGAAGACGATTTGGACTACCCAATCAATGATGGCATCACTCCCCAATCCAAGATTGACTCCATCTATCAGTCCAATACCGAAAAGGGAATCAGAAAGCTTTGTTGTGAGCTCTTAGTTTTGAAGGATGCGGTGGAAAACTTACGTGGGAATATGCGTACTAAGTACTTGGCTTTCCTGAGGATATCTGATGAAGTTGTTGAAATGGAGCATGAGTTAATTGAGCTGCAAAAGCATATTTCTGCACAAGGGATTCTTGTGCAGGATTTGATGAGTGGTGTGTGCCGTGAATTGGAAGAGTGGAACAAAGCTAATGGTGATATTCATGAAGCTCAACAAGATCCTCAAATTGGTGAACTTCAAGATCCTTTTCCAAATAACATAGTTGATGCCAAGACAATATTCTTGGAGAAAATTGATGTTCTCTTGGCTGAACATAAAGTGGAAGAAGCAATAGAGGCTTTAGATGCGGAAGAGAGAAATTCTCCAGACTTGAAAAGCTCGGGAGATACTTCACCTACTGAAGCATCTTCTTACAGGTCTGCTTTCTTGAAAAGAAAGGCAATGCTTGAGGATCAGCTAGTTGAGATCACTGAACAACCTTTAGTTGGTACCCTGGAACTGAAGAAGGCTCTATCTGGTTTGATAAAACTGGGAAAAGGTCCTTTGGCACATCAGCTACTTCTAAAATCATATGGTTCACGCCTCCAAAAGAGCATTGAGGCTTTTCTTCCTGCATGTTCTAGCTGCCCCAAAACATATTCAGCCACCTTATCTAAGCTTGTATTTTCTCTGATCTCATTGACAACAAAAGAATCAGGTTCAATATTTGGTGATGATCCCGCTTATACCAACAGAATTGTTCAGTGGGCAGAGTGGGAAATTGAATCTTTTGTACGACTAGTGAAGGAGAATGCACCCCCTTCAGAGTCCATTTCTGCTCTACGTGCAGCTAGCATTTGCATTCAGGCTAGTCTGAGCCACTGCTCACTGTTGGAATCACAAGGCCTGAAACTCTCAAAGTTGCTTATGGTGCTCTTGCGGCCATATATTGAAGAAGTTTTGGAGTTAAATTTTAGACGGGCTAGAAGAGTGATTCTTGACTTGGATGCAATTGATGAAAGCTTCCCATTGTCACCCTGCTTTGCATCTCCATTGTCTGCTTTTGCAACATCATCAGATACCATGCTCATTGACAGCGGAATCAGGTTTATGTACAATGTCAATGAAATAGTGGAACAGCTAACCCCACTCACCATTTTGCACTTTGGAGGAAGCATATTAACTAGAATTTCACAGCTGTTTGCTAAATACGTGGGTGTTCTAATTAAAGCCTTACCTGGCCCCTCTGAAGATGATAATCTTACAGAGCTGAAAGAGGACATACCCTTCAGGGCTGAAACAGATGCACAACAGCTTGCACTTTTGGGAATAGCATTTACTGTGGCAGAGCTATTACCGATGGCTATATGGAGAACACAGAATGAATGCAAGGAACCAGGTAGTGGACCCACTGAAAACATTGTGCATACTGCAAGTGCCATGGAATCTAAGGAATGGAGGCGCCATATTCAGCATTCATTGGATGAGCTTAGAGATCACTTCTGTCGACAATATGTTTTGAATTTTATCTATTCAAGGGAAGGGAAAACACAATTGAATGCACAAATTTATTTAAATGGGAAAGGAGATGACCTGAGTTGGGACTCTGGCCCACTGCCTTCACTGCCTTTCCAGATGTTATTTGTGAAGCTGCAGCAGTTAGCAACTGTGGCTGGAGATGTATTACTTGGAAAGGAGAAAATACAGAAAATTTTGCTTGCCAGGCTAACAGAGACAGTGGTAATATGGTTGTCTGATGAACAGGAATTCTGGGGTGTATTTGAGGATGAGTCAGCTCCCCTTCGGCCAATCGGGTTGCGGCAGTTGATTCTTGATATGCACTTCACCGTTGAAATTGCACGTTTTGCTGGTTACTCATCACGACATGTGCACCAGATTGCAGCAGCCATAATTGCTCGTGCCATTAGGACCTTCTCTGCTAGAGGCATAGACCCACAAAGTGCACTCCCTGAGGATGAATGGTTTGTGGAAACTGCCAAAGGAGCAATACACAAGCTTATGTCAGACGCTTCAGACACTGATGATGAACACATCATTGATGAACACCTCATTGACGAACACATGATTATGCATGATGAGATGGCCTCTGATTCTGATGACAGTCCGTCTTCCCTTTCATCAGTAGAAAGTTCCGAGTCGTTTGCTTCTGCAAACATGGGTGACTTAGAAAGCCCCACTGACTTGACTGATCCTGAGAACTGA 2340 0.4291 MESSEEEDDLDYPINDGITPQSKIDSIYQSNTEKGIRKLCCELLVLKDAVENLRGNMRTKYLAFLRISDEVVEMEHELIELQKHISAQGILVQDLMSGVCRELEEWNKANGDIHEAQQDPQIGELQDPFPNNIVDAKTIFLEKIDVLLAEHKVEEAIEALDAEERNSPDLKSSGDTSPTEASSYRSAFLKRKAMLEDQLVEITEQPLVGTLELKKALSGLIKLGKGPLAHQLLLKSYGSRLQKSIEAFLPACSSCPKTYSATLSKLVFSLISLTTKESGSIFGDDPAYTNRIVQWAEWEIESFVRLVKENAPPSESISALRAASICIQASLSHCSLLESQGLKLSKLLMVLLRPYIEEVLELNFRRARRVILDLDAIDESFPLSPCFASPLSAFATSSDTMLIDSGIRFMYNVNEIVEQLTPLTILHFGGSILTRISQLFAKYVGVLIKALPGPSEDDNLTELKEDIPFRAETDAQQLALLGIAFTVAELLPMAIWRTQNECKEPGSGPTENIVHTASAMESKEWRRHIQHSLDELRDHFCRQYVLNFIYSREGKTQLNAQIYLNGKGDDLSWDSGPLPSLPFQMLFVKLQQLATVAGDVLLGKEKIQKILLARLTETVVIWLSDEQEFWGVFEDESAPLRPIGLRQLILDMHFTVEIARFAGYSSRHVHQIAAAIIARAIRTFSARGIDPQSALPEDEWFVETAKGAIHKLMSDASDTDDEHIIDEHLIDEHMIMHDEMASDSDDSPSSLSSVESSESFASANMGDLESPTDLTDPEN* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0159 779 MobiDBLite consensus disorder prediction 159 181 - -
Vvi1g0159 779 Pfam Exocyst component 84 C-terminal 141 344 IPR032403 -
Vvi1g0159 779 Gene3D - 255 359 IPR042560 -
Vvi1g0159 779 FunFam Os07g0568000 protein 255 359 - -
Vvi1g0159 779 Coils Coil 146 166 - -
Vvi1g0159 779 PANTHER EXOCYST COMPLEX COMPONENT 8 6 762 IPR033961 GO:0000145|GO:0006887
Vvi1g0159 779 MobiDBLite consensus disorder prediction 739 779 - -
Vvi1g0159 779 MobiDBLite consensus disorder prediction 745 769 - -
Vvi1g0159 779 SUPERFAMILY Cullin repeat-like 140 360 IPR016159 -
Vvi1g0159 779 Gene3D - 137 247 IPR042561 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0159 Vvi-Chr1 1529879 1536488 Dispersed