Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0157 ATGGAAAAATCAGGAGAGCAAATGGTGGATGTGAGGTCGGTGGTCGAAGCCATTTCGACTGATAATGAAGATGCACCTTTGTACCAGGTTGAGAGCCTCTGCATGCGCTGCACCCAAAACGGAACAACAAGGTTTTTGTTTACTGAAATTCCACACTTCAGAAAGATATTGTTGTCAGCCTTTGAATGCCCACATTGTGGTGAGAGGAACAATGAAGTTCAGTTTGCTGGTGAATTACAACCCAGAGGGTGTTCTTACAGTCTGCATTTTTCAGCGGGTGATCAGAAGATGCTCAACCGACAGGTAGTGAAATCAGAATCTGCCACTATCAAGATTCCTGAATTGGATTTTGAGATCCCTCCAGAGGCTCAGTGTGGAAGTCTATCAACAGTGGAAGGAATATTGACAAAAGCCGTGGATGATTTACAGGCCCTTCAGGAAGAACGCAAGAAAGTGGATTCTCAGACTGCGGAAGCAATAGATCAGTTTTTGTTAAAATTGAAGCCTTGTGCAACAGGAGATTCATCTTTCACCTTCAACCTGGATGATCCTGCTGGCAACAGCTTCATTGAGAACCCGTTTGCTCCATCTCCGGATCCATCATTAACTATCAAGTTCTACAAGCGAAGCCCTGAGCAACAAGCATCATTGGGCTACCTTGTTGACTCATCACAGTTGGGAGAGTCTTGTGATGAGGAGTCAATAAAAGAAGTAAAGAATACATCTGATCAAATGAAAAGAGAACCACATGGATCAATTGGAGCCGCAGCCGGCCATCGAGCTATTGCTCAGGTTAATAGTGCAGAGATTGCTGAAAATTTGTTTCGATATTCTACACCAGAAGAGGTAATGACTTTCCCATCAACATGTGGAGCTTGTGCTGCAAGATGCGAGACCCGAATGTTTGTCACCAACATTCCATATTTCCAAGAAGTAATTGTTATGGCTTCATCTTGTGATGGTTGTGGCTACCGAAATTCCGAGTTGAAGCCTGGTGGTCGAATTCCTGTTAAAGGAAAGAAAATTACTGTTTGTGTGAAGAATGTTAATGATCTAAGCCGTGATGTAATAAAGTCAGATACTGCAGGTGTGAGTGTCCCAGAGCTTGACTTGGAGCTGGCTAGTGGCACTTTGGGTGGAGTTGTTACAACTGTTGAAGGCTTGATTACAAAAATTTGTGAAAACCTTGAGAGAGTACACGGATTTACTTTTGGGGACAGTCTCGATGATTCTAAAAGAAGCAAATGGCAAGATTTCAGAATGAGGCTAAGCAAGCTTCTGAGTCTGGAAGAGCCTTGGACTTTAATCATTGATGACGCACTAGCAAATTCTTTTGTTGCACCAACCACTGATGATATCAAAGATGACCATCAGTTAACGTTTGAGGAATACGAGAGGTCATGGGAGCAGAATGAGGAGCTGGGTCTTAATGATATGGACACTTCTTCAGCAGATGCCGCATACAACTGA 1470 0.4327 MEKSGEQMVDVRSVVEAISTDNEDAPLYQVESLCMRCTQNGTTRFLFTEIPHFRKILLSAFECPHCGERNNEVQFAGELQPRGCSYSLHFSAGDQKMLNRQVVKSESATIKIPELDFEIPPEAQCGSLSTVEGILTKAVDDLQALQEERKKVDSQTAEAIDQFLLKLKPCATGDSSFTFNLDDPAGNSFIENPFAPSPDPSLTIKFYKRSPEQQASLGYLVDSSQLGESCDEESIKEVKNTSDQMKREPHGSIGAAAGHRAIAQVNSAEIAENLFRYSTPEEVMTFPSTCGACAARCETRMFVTNIPYFQEVIVMASSCDGCGYRNSELKPGGRIPVKGKKITVCVKNVNDLSRDVIKSDTAGVSVPELDLELASGTLGGVVTTVEGLITKICENLERVHGFTFGDSLDDSKRSKWQDFRMRLSKLLSLEEPWTLIIDDALANSFVAPTTDDIKDDHQLTFEEYERSWEQNEELGLNDMDTSSADAAYN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0157 489 Gene3D ZPR1, zinc finger domain 278 333 IPR042452 -
Vvi1g0157 489 Gene3D ZPR1, zinc finger domain 22 77 IPR042452 -
Vvi1g0157 489 PANTHER ZINC FINGER PROTEIN ZPR1 12 488 IPR040141 -
Vvi1g0157 489 FunFam Zinc finger protein ZPR1 334 476 - -
Vvi1g0157 489 Gene3D ZPR1, A/B domain 334 476 IPR042451 -
Vvi1g0157 489 Gene3D ZPR1, A/B domain 79 219 IPR042451 -
Vvi1g0157 489 Pfam ZPR1 zinc-finger domain 288 446 IPR004457 GO:0008270
Vvi1g0157 489 Pfam ZPR1 zinc-finger domain 32 191 IPR004457 GO:0008270
Vvi1g0157 489 FunFam Zinc finger protein ZPR1 279 333 - -
Vvi1g0157 489 NCBIfam ZPR1 zinc finger domain 289 480 IPR004457 GO:0008270
Vvi1g0157 489 NCBIfam ZPR1 zinc finger domain 34 216 IPR004457 GO:0008270
Vvi1g0157 489 SMART zpr1 32 192 IPR004457 GO:0008270
Vvi1g0157 489 SMART zpr1 288 448 IPR004457 GO:0008270
Vvi1g0157 489 Coils Coil 135 162 - -
Vvi1g0157 489 FunFam zinc finger protein ZPR1 78 219 - -
Vvi1g0157 489 FunFam Zinc finger protein ZPR1 22 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0157 Vvi-Chr1 1515113 1528492 Tandem