Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0153 ATGACGAAGATGGTGATAATTCGGTGGTGCGCACCACCGCCAACTCTCCTGCTCCCTCACCATCCCACCGCACGTTTCTCCTGTCCCAAACCTCCATCCGTCGTCTATGCAAAATCATCTTCTCCTGCTTCTTCTTCGACAACGAGAAGAGCTCTATCTCTTTCTCTAATCTTCTCATCATTCACTTGTTCTTATTATTCTTCTTCAGAAGCTGCCACTTCTGAGTTCTTCGAGCTCCAAGGTTCGGGTGGTGTCAAGGCATTGGACCTCCGAACTGGTTCCGGTGAGGTTCCCGTGGATGGCGACCAGGTTGCAGTTCATTACTATGGAAGATTGGCAGCTAAACAAGGATGGCGTTTTGATTCAACATATGATCACAAAGATGAAACGGGTGAACCGATTCCTTTTGTCTTCACCCTTGGGTCTGGGAAAGTTATTTCAGGGATTGAAGCTGCTGTGAGATCTATGAAAGTAGGGAGCATTCGTCGAGTCATCATCCCACCATCCCAAGGATATCAGAACACATCCCAAGAGCCCATACCACCCAATTTTTTCGACAGGCAGAGATTATTTACCACCATTTTTAATCCAACCCGTCTTGCAAATGGAGAAGGCTCGACGTTGGGGACTCTCATATTTGATATTGAATTGGTCAGCCTGAAGCACCCATGA 672 0.4717 MTKMVIIRWCAPPPTLLLPHHPTARFSCPKPPSVVYAKSSSPASSSTTRRALSLSLIFSSFTCSYYSSSEAATSEFFELQGSGGVKALDLRTGSGEVPVDGDQVAVHYYGRLAAKQGWRFDSTYDHKDETGEPIPFVFTLGSGKVISGIEAAVRSMKVGSIRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLKHP* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0153 223 Gene3D - 64 220 IPR046357 GO:0003755
Vvi1g0153 223 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 97 218 IPR001179 GO:0003755
Vvi1g0153 223 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC 23 222 IPR044197 -
Vvi1g0153 223 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 101 221 IPR001179 GO:0003755
Vvi1g0153 223 SUPERFAMILY FKBP-like 82 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0153 Vvi-Chr1 1495858 1498820 Dispersed