Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0152 ATGACTAAAATGGCTGATACTGCAACAAATCAAGTGGGTAACTCTTATGGTGAGGCAAATGACTCTCAGGAAATTGCATTTGATTTAGGAGTATTTGTTGGGGATTTAAATTTTGAGGAGGATGTAAGCAGTGATGATATATCCCTGGAAGGATTACAAAAAGAATTAGAAGAATGTAGAAACGATGATGTAGTTGCAAACATACTGTCTAAAGGTACAAAATTAAGAGAATATACAAAGGGTGTTGAGAACAATTTACGGCAAGTCGAGTTGGACTCGATTCAGGATTATATAAAAGAAAGTGATAATTTAGTCTCTCTTCATGATCAAATCCGTGATTGCGACAGTATACTGTCACAGATGGAAACACTTCTCAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATAAAAATTCTCCAGGAGAAGTCTATGGATATGGGTCTGAAGCTGAAGAACCGTAAGGTAGCAGAGTCAAAACTGGCAAAATTTGTTGAAGATATTATAGTTCCTCCAAGGATGGTAGACATAATTGTTGATGGAGAGGTGAATGAGGAATATATGAGAACTCTTGAGATCCTAAGTAAGAAGTTGAAGTTTGTTGAAGTGGAACCTATGGTTAAAACTTCAAAAGCTCTAAAAGATGTTCAACCCGAGCTAGAAAAACTTCGTCAAAAAGCAGTCTCAAAGGTGTTTGAGTTCATTGTTCAGAAGCTTTATGCATTGAGGAAACCTAAAACAAATATCCAGATCCTTCAACAGAGTGTTCTTCTAAAATACAAGTATGTTGTTTCCTTTCTCAAGGAACATGGCAAAGAGGTATATATTGAAGTCCGTGCGGCATACATTGATACAATGAACAAGGTTTTAAGTGCACATTTCCGTGCTTATATTCAAGCTTTAGAAAAATTGCAATTGGATATAGCGACATCCAGCGATTTGATTGGTGTTGACACCAGAAGCACCAGTCTTTTCTCAAGAGGAAGAGAACCTTTGAAGAACCGATCTGCTGTTTATGCTTTGGGGGAGAGGATAAGCATTTTAAAGGAGATTGATCAACCTGCATTGATTCCACATATTGCTGAAGCCAGCTCCACAAAGTATCCTTATGAGGTCCTCTTCAGGAGTTTGCACAAGCTGCTTATGGATACTGCTAGTTCCGAGTACCTTTTCTGTGATGATTTTTTTGGGGAAGAAAATATATTTTATGAAATTTTTGCAGGTCCATTTGCTGTCATTGATGAACACTTCAATTCAATCCTTCCAAATTGTTTTGATGCAATTGGCCTGATGCTTATGATCCGCATAATACATCAACACCAGCTTGTTATGTCTCGTCGGCGGATTCCATGCTTGGATTCATATTTGGATAAGGTCAATATTTCTCTGTGGCCACGTTTCAAGATGGTATTTGACATGCACTTGAACAGCTTGCGCAATGCCAACATGAGGGCATTGTGGGAAGATGATATTCATCCTCACTATGTCATGAGGCGTTATGCTGAGTTTACATCCTCACTTATTCACCTCAATGTTGAATATGGAGATGGGCAGCTTGAACTAAACTTGGAACGGTTGAGGATGGCTATTGATGATATGGTCATCAAGCTTGCTAAAACATTCTCAAAAACTAAACTACAGACTGTGTTTCTTATAAACAACTATGATATGACAATTGCCATTTTGAAGGAAGCTGGTCCAGAAGGTGGGAAAATTCAACTGCACTTCGAGGAACTTCTGAAGAGCAACACAGCAATATTTGTGGAGGAACTACTACTAGAGCATTTCGGTGACCTAATCAAGTTTGTAAAGACCAGGGCCTCCGAGGACCCGAGTTCCAGCTCCGAGAGGCCCATAACTGTGGCTGAAGTTGAACCGCTTGTGAAGGACTTTGCAAGCAGATGGAAATCTGCGATAGAGCTGATGCACAAAGATGTGATTACCTCTTTCAGCAATTTCTTGTGCGGTATGGAGATCTTGAGAGCTGCATTGACACAGCTGCTGCTTTATTATACCAGACTTTCCGATTGCATAAAAAGAATTCCCGGTGGATCGGCCCTGAACAAAGATCTCGTTTCCATATCATCGATCATGTATGAAATCAGAAAATACTCGAGAACTTTCTAA 2133 0.3947 MTKMADTATNQVGNSYGEANDSQEIAFDLGVFVGDLNFEEDVSSDDISLEGLQKELEECRNDDVVANILSKGTKLREYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDSILSQMETLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDGEVNEEYMRTLEILSKKLKFVEVEPMVKTSKALKDVQPELEKLRQKAVSKVFEFIVQKLYALRKPKTNIQILQQSVLLKYKYVVSFLKEHGKEVYIEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVDTRSTSLFSRGREPLKNRSAVYALGERISILKEIDQPALIPHIAEASSTKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEENIFYEIFAGPFAVIDEHFNSILPNCFDAIGLMLMIRIIHQHQLVMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANMRALWEDDIHPHYVMRRYAEFTSSLIHLNVEYGDGQLELNLERLRMAIDDMVIKLAKTFSKTKLQTVFLINNYDMTIAILKEAGPEGGKIQLHFEELLKSNTAIFVEELLLEHFGDLIKFVKTRASEDPSSSSERPITVAEVEPLVKDFASRWKSAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIPGGSALNKDLVSISSIMYEIRKYSRTF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0152 710 PANTHER SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 43 709 IPR007258 -
Vvi1g0152 710 Coils Coil 186 206 - -
Vvi1g0152 710 Pfam Vps52 / Sac2 family 91 589 IPR007258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0152 Vvi-Chr1 1467432 1494992 Dispersed