Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0148 ATGAACTTGAATGATCGAACCAAACCCAGAAAACCCAGGATACTACCTCCCTCTTCTTCTTCTTCTTCTTCTTCGGAAACCCTAACCCCAATTCCCAAAATGGCGCGAAAATCCATTCTCAAATCAACTGTTGTGACCGTCTTATGCGTTTTTGGACTGTATGGGTTGTCCACCACTTTTTTCAACCCCATAAACCCTTACCACTCCAGGCTCGATCTTAGCCTCCCTCTTGATTCGTCGTCCAAGTCGCTTTCGCTGTTGAGCACTGATTCCGGGGAGAATTTGTCGAAATTTTCCCGGAACTTCGGGCCGGTGAAGGTGTACATGTACGATCTTCCGAGGAAGTTCACGTACGGCGTGATCGAGAGCTACGCGGTGGCTCGGGGAGGGCTGGAGAAGGTGCCGGTGGATGACGTGTCGTCGCTGAAGTACCCCGGGCATCAGCACTCCGGGGAGTGGTACTTGTTCTCGGACCTGATCCGGGAGGACCGGGGTAGGAGGTACGTTGTTAGGGTTTCGGATCCGGAGGAGGCGGATTTGTTCTACGTTTCGTTCTTTTCGTCTCTTAGTTTGGTGGTGAACCCAATTCGGCCAGCGAATGGGGAGGGTGCCGGAACTGGGTACAGCGATGAGGAGATGCAGGAGAGTTTGATGGAATGGTTGGAGCAGCAGGAGTATTGGAAGAGGAACAATGGGCGGGACCATGTGTTTATATGTCAGGATCCCAATGCTCTGCATCTGATTGTAGACAGAGTGAAGAATGGGGTGCTGCTTGTTTCGGATTTCGGGAGGCTGAGGAGCGACACAGCATCCTTGGTTAAGGATGTGATTTTGCCGTATGCCCATCGGATTAAGTCTTACAGTGGGGAGATTGGAGTTGAGAATCGAAAATCTTTGTTGTTCTTTATGGGAAATCGTTATCGCAAAGAGGGAGGAAAAATCCGGGACTTGCTTTTCCAAATACTTGAACAAGAAGAGGATGTTATAATAAAACATGGTGCACAATCCAGAGAGAGTCGACGTATGGCTTCACAAGGGATGCATTCATCAAAGTTTTGTTTACATCCTGCTGGTGATACTCCTTCAGCCTGCCGACTCTTTGATGCTATTGTTAGCTTGTGTGTCCCAGTGATAGTCAGTGACCAGATCGAGTTACCTTTTGAAGATGTCATAGACTACAGAAAAATTGCAATATTTGTAGATTCCACCTCTGCTGTAAAGCCAGGATTCTTGGTTAAGAATCTGAGAAAAATAACCAGAGAGAGAATTTTGGAATACCAGCGGGAGATGCAAGAGGTGACCCGATACTTCGAATATGAAGATACAAATGGAACAGTTAGTGAAATCTGGCGACAAGTCTCCATGAAGCTCCCACTTATTAAATTGATGATCAATCGTGATAAACGCCTTGTCAAGAGGGAAATGACTGAACCAGACTGCTCCTGTCTCTGTTCAAACCAGTCCGAGATCAGGACCTTTTTATGA 1485 0.4734 MNLNDRTKPRKPRILPPSSSSSSSSETLTPIPKMARKSILKSTVVTVLCVFGLYGLSTTFFNPINPYHSRLDLSLPLDSSSKSLSLLSTDSGENLSKFSRNFGPVKVYMYDLPRKFTYGVIESYAVARGGLEKVPVDDVSSLKYPGHQHSGEWYLFSDLIREDRGRRYVVRVSDPEEADLFYVSFFSSLSLVVNPIRPANGEGAGTGYSDEEMQESLMEWLEQQEYWKRNNGRDHVFICQDPNALHLIVDRVKNGVLLVSDFGRLRSDTASLVKDVILPYAHRIKSYSGEIGVENRKSLLFFMGNRYRKEGGKIRDLLFQILEQEEDVIIKHGAQSRESRRMASQGMHSSKFCLHPAGDTPSACRLFDAIVSLCVPVIVSDQIELPFEDVIDYRKIAIFVDSTSAVKPGFLVKNLRKITRERILEYQREMQEVTRYFEYEDTNGTVSEIWRQVSMKLPLIKLMINRDKRLVKREMTEPDCSCLCSNQSEIRTFL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0148 494 MobiDBLite consensus disorder prediction 1 29 - -
Vvi1g0148 494 Pfam Exostosin family 104 415 IPR040911 -
Vvi1g0148 494 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 104 437 IPR004263 GO:0006486|GO:0016757
Vvi1g0148 494 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0148 Vvi-Chr1 1418527 1421978 Dispersed/Transposed