Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g0146 ATGAAGGAGAAGCAGACCAGAAAATCACACGCACCCAGAGAGAAGAACAATCCAGTTTCAATCCCTGATGAGTTAGTTTTTGAAATACTCACCTACATTCCCGTCAAATCTCTACTCCAATGCAGGGGTGTTTGCAAGAGATGGCGGTCTATGATCTCCGATCCATCGTTCATCGAGGCCCATCGATCCCGTTCAGCTACCACTCTCCTCATCTCCTTCCCCGACACGCACCGCCCTCGCAGGAAGCATCATCTCTTCTCCATAAGAGATGGAGAAGCGCGCCAACTCTCCGGATCTCGTCACTGGAATACTTCTCAGTCCGTAAACGGCTTGATTTGTCTCTACGAGCAGCACGATCGTTCGTTTCCGAAACTATCCTTTCGCGTGACTCTCTGCAATCCTAGCACTCGAGAACGCGTGACTCTTCCACCCACACGCTTCTCAAACCCAGACTTGTGTTTCGACCACCAGCACATCTCTCTAGGGTTCGACCCTTCCACCAAGACCTACAAAATCCTGAAGGTATGGTTCGAAAGATTCAACAGCATCATGTGTGAGATTCTCACTCTGGGCAGCCGCGCATGGAGAATCATCAAAGATGGCCTAGAATATACATTGGAAGCAAAGGGGATTTGCCTCAACGGGACTATATATTGGGCCGATGCAAGGCATATATCTGAAGACTATCCTCACTTTGTCGTCATGCAGAACAGAGTGATAGCATTCGACGTTGGAGAAGAGAAGTTCCGATCTGTTCCCGTCCCGCCGGAAGTCCCCATATGGGATAAATGCATGTCGAGCATCATACAAATCGGTGGGCACATGGCCATTGCAGACTACCAACATGTGGCGACAGGCATTAGTACTGTTATGCTAATCTGGAAATTGGAGGATTCTGTAAATGGGATCTGGAGCCAGAAGAGAATTCTGCTGCCTGAATCTTGGATACACAGGTCGGTACCAAACCCAAGATTGTGTCATTTCTGCGTTGCTTCCAGTGATGGTGGTAACATTATATTGATTCCCAGCGGGTTTTTTAGAGACTTTTATGTGCTTCACTGTAACGTAGAGGAAGGGCGTCTGTGGAGGGAGGCTATACGTCGGCCACCTCAGGATGATTGGGATTCTCGTTCTTCAATTGTTACTTCTCGTCAAGTCTGTGAGTATGTGGAGAGTCTGGTTTCTTTGAAGGAAATTTGCAGGTTGTAG 1209 0.4814 MKEKQTRKSHAPREKNNPVSIPDELVFEILTYIPVKSLLQCRGVCKRWRSMISDPSFIEAHRSRSATTLLISFPDTHRPRRKHHLFSIRDGEARQLSGSRHWNTSQSVNGLICLYEQHDRSFPKLSFRVTLCNPSTRERVTLPPTRFSNPDLCFDHQHISLGFDPSTKTYKILKVWFERFNSIMCEILTLGSRAWRIIKDGLEYTLEAKGICLNGTIYWADARHISEDYPHFVVMQNRVIAFDVGEEKFRSVPVPPEVPIWDKCMSSIIQIGGHMAIADYQHVATGISTVMLIWKLEDSVNGIWSQKRILLPESWIHRSVPNPRLCHFCVASSDGGNIILIPSGFFRDFYVLHCNVEEGRLWREAIRRPPQDDWDSRSSIVTSRQVCEYVESLVSLKEICRL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g0146 402 ProSiteProfiles F-box domain profile. 15 61 IPR001810 GO:0005515
Vvi1g0146 402 Pfam F-box associated domain 210 351 IPR013187 -
Vvi1g0146 402 Pfam F-box domain 21 57 IPR001810 GO:0005515
Vvi1g0146 402 PANTHER BNAA05G37150D PROTEIN-RELATED 20 379 - -
Vvi1g0146 402 SUPERFAMILY F-box domain 19 118 IPR036047 GO:0005515
Vvi1g0146 402 CDD F-box_AtFBW1-like 20 57 - -
Vvi1g0146 402 NCBIfam F-box protein interaction domain 106 358 IPR017451 -
Vvi1g0146 402 SMART fbox_2 21 61 IPR001810 GO:0005515
Vvi1g0146 402 Gene3D - 17 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g0146 Vvi-Chr1 1371915 1373123 Dispersed